Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.34■□□□□ 0.05
SRP9P49458 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SRP9P49458 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.34■□□□□ 0.05
SRP9P49458 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SRP9P49458 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SRP9P49458 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 AL513477.1-201ENST00000602865 2407 ntBASIC15.34■□□□□ 0.05
SRP9P49458 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SRP9P49458 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.34■□□□□ 0.05
SRP9P49458 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SRP9P49458 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.33■□□□□ 0.05
SRP9P49458 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.33■□□□□ 0.05
SRP9P49458 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
SRP9P49458 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.33■□□□□ 0.05
SRP9P49458 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.33■□□□□ 0.05
SRP9P49458 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SRP9P49458 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SRP9P49458 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SRP9P49458 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.33■□□□□ 0.04
SRP9P49458 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.33■□□□□ 0.04
SRP9P49458 KRT18P65-201ENST00000439811 1286 ntBASIC15.33■□□□□ 0.04
SRP9P49458 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 AC090616.6-201ENST00000582640 721 ntBASIC15.33■□□□□ 0.04
SRP9P49458 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 AC009154.2-201ENST00000621177 724 ntBASIC15.33■□□□□ 0.04
SRP9P49458 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.33■□□□□ 0.04
SRP9P49458 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.33■□□□□ 0.04
SRP9P49458 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 AC103702.1-201ENST00000548801 2630 ntBASIC15.33■□□□□ 0.04
SRP9P49458 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SRP9P49458 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.33■□□□□ 0.04
SRP9P49458 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.33■□□□□ 0.04
SRP9P49458 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
SRP9P49458 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRP9P49458 AC005915.1-201ENST00000624912 2018 ntBASIC15.33■□□□□ 0.04
SRP9P49458 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.32■□□□□ 0.04
SRP9P49458 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SRP9P49458 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRP9P49458 AC069148.1-201ENST00000608741 768 ntBASIC15.32■□□□□ 0.04
SRP9P49458 IGHV3-41-201ENST00000613121 348 ntBASIC15.32■□□□□ 0.04
SRP9P49458 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.32■□□□□ 0.04
SRP9P49458 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.32■□□□□ 0.04
SRP9P49458 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.32■□□□□ 0.04
SRP9P49458 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms