Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 AC005034.1-201ENST00000426657 489 ntBASIC17.97■□□□□ 0.47
MTHFRP42898 AC055876.3-201ENST00000431496 288 ntBASIC17.97■□□□□ 0.47
MTHFRP42898 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.97■□□□□ 0.47
MTHFRP42898 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.97■□□□□ 0.47
MTHFRP42898 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 AC099522.2-201ENST00000607001 744 ntBASIC17.97■□□□□ 0.47
MTHFRP42898 AC138649.4-201ENST00000612222 287 ntBASIC17.97■□□□□ 0.47
MTHFRP42898 AL035252.4-201ENST00000624174 288 ntBASIC17.97■□□□□ 0.47
MTHFRP42898 NOC2LP2-201ENST00000407594 1944 ntBASIC17.97■□□□□ 0.47
MTHFRP42898 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.97■□□□□ 0.47
MTHFRP42898 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MTHFRP42898 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MTHFRP42898 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.96■□□□□ 0.47
MTHFRP42898 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.96■□□□□ 0.47
MTHFRP42898 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.96■□□□□ 0.47
MTHFRP42898 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.96■□□□□ 0.47
MTHFRP42898 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
MTHFRP42898 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.96■□□□□ 0.47
MTHFRP42898 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.96■□□□□ 0.47
MTHFRP42898 AC015922.1-201ENST00000421102 1152 ntBASIC17.96■□□□□ 0.47
MTHFRP42898 KRT18P32-201ENST00000424695 1287 ntBASIC17.96■□□□□ 0.47
MTHFRP42898 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.96■□□□□ 0.47
MTHFRP42898 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 TERF1P3-201ENST00000505638 1227 ntBASIC17.96■□□□□ 0.47
MTHFRP42898 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.96■□□□□ 0.47
MTHFRP42898 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.96■□□□□ 0.47
MTHFRP42898 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 AC087641.1-201ENST00000557561 1021 ntBASIC17.96■□□□□ 0.47
MTHFRP42898 AC051619.7-201ENST00000568314 623 ntBASIC17.96■□□□□ 0.47
MTHFRP42898 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.96■□□□□ 0.47
MTHFRP42898 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.96■□□□□ 0.47
MTHFRP42898 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MTHFRP42898 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MTHFRP42898 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
MTHFRP42898 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.96■□□□□ 0.46
MTHFRP42898 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.96■□□□□ 0.46
MTHFRP42898 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MTHFRP42898 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.96■□□□□ 0.46
MTHFRP42898 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.95■□□□□ 0.46
MTHFRP42898 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MTHFRP42898 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MTHFRP42898 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.95■□□□□ 0.46
MTHFRP42898 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.95■□□□□ 0.46
MTHFRP42898 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.95■□□□□ 0.46
MTHFRP42898 AP001059.3-201ENST00000619053 235 ntBASIC17.95■□□□□ 0.46
MTHFRP42898 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.95■□□□□ 0.46
MTHFRP42898 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MTHFRP42898 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms