Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC5P40937 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC5P40937 AC129492.6-201ENST00000611383 1305 ntBASIC18.95■□□□□ 0.62
RFC5P40937 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC5P40937 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC5P40937 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC5P40937 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RFC5P40937 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 KRT18P13-201ENST00000400056 1290 ntBASIC18.94■□□□□ 0.62
RFC5P40937 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.94■□□□□ 0.62
RFC5P40937 AC004832.2-201ENST00000426397 482 ntBASIC18.94■□□□□ 0.62
RFC5P40937 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC5P40937 CXCL1P1-201ENST00000502804 216 ntBASIC18.94■□□□□ 0.62
RFC5P40937 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RFC5P40937 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.94■□□□□ 0.62
RFC5P40937 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.94■□□□□ 0.62
RFC5P40937 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.94■□□□□ 0.62
RFC5P40937 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC5P40937 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFC5P40937 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.94■□□□□ 0.62
RFC5P40937 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC5P40937 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC5P40937 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC5P40937 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC5P40937 AC002310.6-201ENST00000624451 1377 ntBASIC18.93■□□□□ 0.62
RFC5P40937 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC5P40937 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC5P40937 RHOQP3-201ENST00000437982 621 ntBASIC18.93■□□□□ 0.62
RFC5P40937 FAM185BP-201ENST00000443595 716 ntBASIC18.93■□□□□ 0.62
RFC5P40937 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC5P40937 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC5P40937 AC092865.5-201ENST00000545435 363 ntBASIC18.93■□□□□ 0.62
RFC5P40937 AC018845.2-201ENST00000568326 409 ntBASIC18.93■□□□□ 0.62
RFC5P40937 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.93■□□□□ 0.62
RFC5P40937 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 CROCCP2-202ENST00000412962 2773 ntBASIC18.93■□□□□ 0.62
RFC5P40937 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFC5P40937 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.93■□□□□ 0.62
RFC5P40937 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFC5P40937 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RFC5P40937 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RFC5P40937 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 AC023274.1-201ENST00000418278 595 ntBASIC18.92■□□□□ 0.62
RFC5P40937 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.92■□□□□ 0.62
RFC5P40937 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RFC5P40937 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.92■□□□□ 0.62
RFC5P40937 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.92■□□□□ 0.62
RFC5P40937 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 AC090340.1-201ENST00000620778 4980 ntBASIC18.92■□□□□ 0.62
RFC5P40937 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.92■□□□□ 0.62
RFC5P40937 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.92■□□□□ 0.62
RFC5P40937 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFC5P40937 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC5P40937 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFC5P40937 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC5P40937 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC5P40937 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
RFC5P40937 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFC5P40937 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms