Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.22■□□□□ 0.51
CTNNA1P35221 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.22■□□□□ 0.51
CTNNA1P35221 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.22■□□□□ 0.51
CTNNA1P35221 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.22■□□□□ 0.51
CTNNA1P35221 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 AC124864.1-201ENST00000623408 392 ntBASIC18.22■□□□□ 0.51
CTNNA1P35221 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.22■□□□□ 0.51
CTNNA1P35221 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.22■□□□□ 0.51
CTNNA1P35221 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 AC008741.2-201ENST00000612792 3115 ntBASIC18.22■□□□□ 0.51
CTNNA1P35221 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.22■□□□□ 0.51
CTNNA1P35221 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTNNA1P35221 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
CTNNA1P35221 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTNNA1P35221 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 AC103564.2-201ENST00000432853 1299 ntBASIC18.21■□□□□ 0.51
CTNNA1P35221 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.21■□□□□ 0.51
CTNNA1P35221 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.21■□□□□ 0.51
CTNNA1P35221 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.21■□□□□ 0.51
CTNNA1P35221 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTNNA1P35221 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CTNNA1P35221 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNNA1P35221 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNNA1P35221 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CTNNA1P35221 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CTNNA1P35221 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.2■□□□□ 0.5
CTNNA1P35221 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.2■□□□□ 0.5
CTNNA1P35221 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CTNNA1P35221 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CTNNA1P35221 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CTNNA1P35221 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.2■□□□□ 0.5
CTNNA1P35221 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CTNNA1P35221 AC124947.2-201ENST00000547118 1133 ntBASIC18.2■□□□□ 0.5
CTNNA1P35221 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 AC090616.6-201ENST00000582640 721 ntBASIC18.2■□□□□ 0.5
CTNNA1P35221 STK25P1-201ENST00000585406 838 ntBASIC18.2■□□□□ 0.5
CTNNA1P35221 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 KRT8P10-201ENST00000450021 1447 ntBASIC18.2■□□□□ 0.5
CTNNA1P35221 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTNNA1P35221 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNNA1P35221 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNNA1P35221 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNNA1P35221 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.19■□□□□ 0.5
CTNNA1P35221 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.19■□□□□ 0.5
CTNNA1P35221 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNNA1P35221 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNNA1P35221 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTNNA1P35221 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms