Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TM4SF1P30408 AP3S2-216ENST00000617003 1561 ntBASIC21.16■□□□□ 0.98
TM4SF1P30408 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.16■□□□□ 0.98
TM4SF1P30408 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.16■□□□□ 0.98
TM4SF1P30408 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.16■□□□□ 0.98
TM4SF1P30408 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF1P30408 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.16■□□□□ 0.98
TM4SF1P30408 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.16■□□□□ 0.98
TM4SF1P30408 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.16■□□□□ 0.98
TM4SF1P30408 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF1P30408 RARRES2P9-201ENST00000565168 469 ntBASIC21.16■□□□□ 0.98
TM4SF1P30408 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TM4SF1P30408 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TM4SF1P30408 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TM4SF1P30408 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF1P30408 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.15■□□□□ 0.98
TM4SF1P30408 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.15■□□□□ 0.98
TM4SF1P30408 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.15■□□□□ 0.98
TM4SF1P30408 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.15■□□□□ 0.98
TM4SF1P30408 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
TM4SF1P30408 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 TOP3BP1-201ENST00000420768 1380 ntBASIC21.15■□□□□ 0.98
TM4SF1P30408 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
TM4SF1P30408 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TM4SF1P30408 AC091167.2-201ENST00000579581 588 ntBASIC21.15■□□□□ 0.98
TM4SF1P30408 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF1P30408 ABALON-201ENST00000629058 1903 ntBASIC21.15■□□□□ 0.98
TM4SF1P30408 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.15■□□□□ 0.98
TM4SF1P30408 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF1P30408 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TM4SF1P30408 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TM4SF1P30408 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TM4SF1P30408 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.14■□□□□ 0.98
TM4SF1P30408 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.14■□□□□ 0.97
TM4SF1P30408 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF1P30408 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF1P30408 AC009477.1-201ENST00000452936 217 ntBASIC21.14■□□□□ 0.97
TM4SF1P30408 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF1P30408 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF1P30408 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.14■□□□□ 0.97
TM4SF1P30408 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF1P30408 AC004233.3-201ENST00000607794 1269 ntBASIC21.14■□□□□ 0.97
TM4SF1P30408 AC007967.4-201ENST00000614700 386 ntBASIC21.14■□□□□ 0.97
TM4SF1P30408 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
TM4SF1P30408 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF1P30408 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF1P30408 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF1P30408 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF1P30408 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.14■□□□□ 0.97
TM4SF1P30408 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.14■□□□□ 0.97
TM4SF1P30408 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF1P30408 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 CU639417.3-201ENST00000624240 1404 ntBASIC21.13■□□□□ 0.97
TM4SF1P30408 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF1P30408 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF1P30408 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF1P30408 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF1P30408 ARSEP1-201ENST00000420443 635 ntBASIC21.13■□□□□ 0.97
TM4SF1P30408 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.13■□□□□ 0.97
TM4SF1P30408 U91328.1-201ENST00000437528 223 ntBASIC21.13■□□□□ 0.97
TM4SF1P30408 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.13■□□□□ 0.97
TM4SF1P30408 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 AC009407.1-201ENST00000568958 598 ntBASIC21.13■□□□□ 0.97
TM4SF1P30408 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF1P30408 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF1P30408 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF1P30408 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms