Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA3P29320 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHA3P29320 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.79■□□□□ 0.28
EPHA3P29320 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.79■□□□□ 0.28
EPHA3P29320 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 AC010203.1-204ENST00000548782 407 ntBASIC16.79■□□□□ 0.28
EPHA3P29320 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA3P29320 AC011558.1-201ENST00000623459 338 ntBASIC16.79■□□□□ 0.28
EPHA3P29320 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EPHA3P29320 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA3P29320 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA3P29320 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
EPHA3P29320 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA3P29320 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 EGFEM1P-202ENST00000431685 1563 ntBASIC16.78■□□□□ 0.28
EPHA3P29320 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA3P29320 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 AC007967.3-201ENST00000434308 558 ntBASIC16.78■□□□□ 0.28
EPHA3P29320 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA3P29320 AC005332.3-201ENST00000589904 676 ntBASIC16.78■□□□□ 0.28
EPHA3P29320 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
EPHA3P29320 AC145285.6-201ENST00000604632 637 ntBASIC16.78■□□□□ 0.28
EPHA3P29320 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.78■□□□□ 0.28
EPHA3P29320 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
EPHA3P29320 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 AC092364.2-201ENST00000596710 2692 ntBASIC16.78■□□□□ 0.28
EPHA3P29320 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA3P29320 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA3P29320 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
EPHA3P29320 AC132872.4-202ENST00000622924 2756 ntBASIC16.77■□□□□ 0.28
EPHA3P29320 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
EPHA3P29320 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.77■□□□□ 0.28
EPHA3P29320 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHA3P29320 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHA3P29320 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
EPHA3P29320 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
EPHA3P29320 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHA3P29320 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHA3P29320 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.77■□□□□ 0.28
EPHA3P29320 TMEM191A-211ENST00000637163 1067 ntBASIC16.77■□□□□ 0.28
EPHA3P29320 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA3P29320 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHA3P29320 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.77■□□□□ 0.27
EPHA3P29320 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.77■□□□□ 0.27
EPHA3P29320 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.77■□□□□ 0.27
EPHA3P29320 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHA3P29320 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms