Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTGFP29279 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTGFP29279 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTGFP29279 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CTGFP29279 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.16■□□□□ 0.66
CTGFP29279 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.16■□□□□ 0.66
CTGFP29279 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CTGFP29279 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CTGFP29279 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CTGFP29279 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTGFP29279 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.16■□□□□ 0.66
CTGFP29279 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.16■□□□□ 0.66
CTGFP29279 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.16■□□□□ 0.66
CTGFP29279 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.16■□□□□ 0.66
CTGFP29279 RPS2P32-201ENST00000439199 892 ntBASIC19.16■□□□□ 0.66
CTGFP29279 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.16■□□□□ 0.66
CTGFP29279 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.16■□□□□ 0.66
CTGFP29279 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.16■□□□□ 0.66
CTGFP29279 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.16■□□□□ 0.66
CTGFP29279 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CTGFP29279 AC140912.1-201ENST00000577171 1054 ntBASIC19.16■□□□□ 0.66
CTGFP29279 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.16■□□□□ 0.66
CTGFP29279 LINC01451-201ENST00000623792 534 ntBASIC19.16■□□□□ 0.66
CTGFP29279 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.16■□□□□ 0.66
CTGFP29279 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.16■□□□□ 0.66
CTGFP29279 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CTGFP29279 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTGFP29279 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CTGFP29279 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.15■□□□□ 0.66
CTGFP29279 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
CTGFP29279 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 RPL37AP1-201ENST00000412502 279 ntBASIC19.15■□□□□ 0.66
CTGFP29279 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.15■□□□□ 0.66
CTGFP29279 AL353779.1-201ENST00000434793 351 ntBASIC19.15■□□□□ 0.66
CTGFP29279 ACA64.2-201ENST00000459014 129 ntBASIC19.15■□□□□ 0.66
CTGFP29279 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.15■□□□□ 0.66
CTGFP29279 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.15■□□□□ 0.66
CTGFP29279 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.15■□□□□ 0.66
CTGFP29279 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.15■□□□□ 0.66
CTGFP29279 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.15■□□□□ 0.66
CTGFP29279 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.15■□□□□ 0.66
CTGFP29279 AC073389.1-201ENST00000595595 795 ntBASIC19.15■□□□□ 0.66
CTGFP29279 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.15■□□□□ 0.66
CTGFP29279 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.15■□□□□ 0.66
CTGFP29279 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.15■□□□□ 0.66
CTGFP29279 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.15■□□□□ 0.66
CTGFP29279 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.15■□□□□ 0.66
CTGFP29279 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.15■□□□□ 0.66
CTGFP29279 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 AC087499.5-201ENST00000452760 1342 ntBASIC19.15■□□□□ 0.66
CTGFP29279 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTGFP29279 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTGFP29279 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
CTGFP29279 LINC00304-203ENST00000565008 1864 ntBASIC19.14■□□□□ 0.65
CTGFP29279 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CTGFP29279 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.14■□□□□ 0.65
CTGFP29279 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.14■□□□□ 0.65
CTGFP29279 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.14■□□□□ 0.65
CTGFP29279 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.14■□□□□ 0.65
CTGFP29279 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.14■□□□□ 0.65
CTGFP29279 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.14■□□□□ 0.65
CTGFP29279 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CTGFP29279 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CTGFP29279 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTGFP29279 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTGFP29279 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTGFP29279 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTGFP29279 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CTGFP29279 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTGFP29279 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTGFP29279 AC105233.2-201ENST00000523697 349 ntBASIC19.13■□□□□ 0.65
CTGFP29279 AF228730.5-201ENST00000530288 346 ntBASIC19.13■□□□□ 0.65
CTGFP29279 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.13■□□□□ 0.65
CTGFP29279 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.13■□□□□ 0.65
CTGFP29279 WASH4P-201ENST00000564273 1246 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms