Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 AL512384.1-201ENST00000406683 331 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA3P22001 HCG4-201ENST00000418983 998 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.86■□□□□ 0.93
KCNA3P22001 GNAQP1-201ENST00000444815 1067 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KCNA3P22001 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.86■□□□□ 0.93
KCNA3P22001 AC106886.1-201ENST00000568660 600 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KCNA3P22001 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.86■□□□□ 0.93
KCNA3P22001 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNA3P22001 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA3P22001 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
KCNA3P22001 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA3P22001 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KCNA3P22001 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
KCNA3P22001 FOXO1B-201ENST00000504678 1527 ntBASIC20.85■□□□□ 0.93
KCNA3P22001 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KCNA3P22001 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNA3P22001 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNA3P22001 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNA3P22001 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KCNA3P22001 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
KCNA3P22001 MIR6805-201ENST00000615055 62 ntBASIC20.85■□□□□ 0.93
KCNA3P22001 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNA3P22001 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KCNA3P22001 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNA3P22001 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA3P22001 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KCNA3P22001 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNA3P22001 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNA3P22001 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.84■□□□□ 0.93
KCNA3P22001 MIR658-201ENST00000385210 100 ntBASIC20.84■□□□□ 0.93
KCNA3P22001 RPL37AP1-201ENST00000412502 279 ntBASIC20.84■□□□□ 0.93
KCNA3P22001 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.84■□□□□ 0.93
KCNA3P22001 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 AC022210.1-201ENST00000449856 793 ntBASIC20.84■□□□□ 0.93
KCNA3P22001 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.84■□□□□ 0.93
KCNA3P22001 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNA3P22001 AC073389.1-201ENST00000595595 795 ntBASIC20.84■□□□□ 0.93
KCNA3P22001 CHCHD2P3-201ENST00000603038 451 ntBASIC20.84■□□□□ 0.93
KCNA3P22001 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.84■□□□□ 0.93
KCNA3P22001 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KCNA3P22001 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNA3P22001 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KCNA3P22001 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNA3P22001 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
KCNA3P22001 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KCNA3P22001 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.83■□□□□ 0.93
KCNA3P22001 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
KCNA3P22001 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNA3P22001 KRT17P8-201ENST00000540749 863 ntBASIC20.83■□□□□ 0.93
KCNA3P22001 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.83■□□□□ 0.93
KCNA3P22001 MIR4259-201ENST00000584466 101 ntBASIC20.83■□□□□ 0.93
KCNA3P22001 AC004790.1-201ENST00000612686 536 ntBASIC20.83■□□□□ 0.93
KCNA3P22001 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.83■□□□□ 0.93
KCNA3P22001 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNA3P22001 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNA3P22001 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
KCNA3P22001 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
KCNA3P22001 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.83■□□□□ 0.92
KCNA3P22001 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.83■□□□□ 0.92
KCNA3P22001 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNA3P22001 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms