Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHBP21912 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SDHBP21912 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHBP21912 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.83■□□□□ 0.28
SDHBP21912 AL049757.1-201ENST00000616842 1596 ntBASIC16.83■□□□□ 0.28
SDHBP21912 AL162274.1-201ENST00000617191 1098 ntBASIC16.83■□□□□ 0.28
SDHBP21912 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.83■□□□□ 0.28
SDHBP21912 AC097637.2-201ENST00000624096 1997 ntBASIC16.83■□□□□ 0.28
SDHBP21912 AL645728.2-201ENST00000641974 660 ntBASIC16.83■□□□□ 0.28
SDHBP21912 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SDHBP21912 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHBP21912 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHBP21912 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SDHBP21912 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHBP21912 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDHBP21912 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.82■□□□□ 0.28
SDHBP21912 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.82■□□□□ 0.28
SDHBP21912 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SDHBP21912 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.82■□□□□ 0.28
SDHBP21912 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.82■□□□□ 0.28
SDHBP21912 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.82■□□□□ 0.28
SDHBP21912 HILS1-202ENST00000545329 423 ntBASIC16.82■□□□□ 0.28
SDHBP21912 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.82■□□□□ 0.28
SDHBP21912 AC099522.2-201ENST00000607001 744 ntBASIC16.82■□□□□ 0.28
SDHBP21912 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.82■□□□□ 0.28
SDHBP21912 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 AP000997.3-201ENST00000623333 2250 ntBASIC16.82■□□□□ 0.28
SDHBP21912 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
SDHBP21912 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SDHBP21912 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDHBP21912 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.81■□□□□ 0.28
SDHBP21912 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SDHBP21912 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.81■□□□□ 0.28
SDHBP21912 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.81■□□□□ 0.28
SDHBP21912 GIMAP3P-201ENST00000495150 836 ntBASIC16.81■□□□□ 0.28
SDHBP21912 STK19B-204ENST00000512515 211 ntBASIC16.81■□□□□ 0.28
SDHBP21912 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.81■□□□□ 0.28
SDHBP21912 AL135744.1-201ENST00000565098 629 ntBASIC16.81■□□□□ 0.28
SDHBP21912 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SDHBP21912 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.81■□□□□ 0.28
SDHBP21912 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.81■□□□□ 0.28
SDHBP21912 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.81■□□□□ 0.28
SDHBP21912 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SDHBP21912 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDHBP21912 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SDHBP21912 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SDHBP21912 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.8■□□□□ 0.28
SDHBP21912 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.8■□□□□ 0.28
SDHBP21912 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.8■□□□□ 0.28
SDHBP21912 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.8■□□□□ 0.28
SDHBP21912 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHBP21912 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms