Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CD58P19256 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.51■□□□□ 0.55
CD58P19256 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD58P19256 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD58P19256 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CD58P19256 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD58P19256 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.5■□□□□ 0.55
CD58P19256 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.5■□□□□ 0.55
CD58P19256 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.5■□□□□ 0.55
CD58P19256 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.5■□□□□ 0.55
CD58P19256 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CD58P19256 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CD58P19256 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD58P19256 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CD58P19256 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CD58P19256 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.49■□□□□ 0.55
CD58P19256 SLC25A1P3-201ENST00000395415 828 ntBASIC18.49■□□□□ 0.55
CD58P19256 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.49■□□□□ 0.55
CD58P19256 AF186996.4-201ENST00000467186 377 ntBASIC18.49■□□□□ 0.55
CD58P19256 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.49■□□□□ 0.55
CD58P19256 AL160237.2-201ENST00000556165 472 ntBASIC18.49■□□□□ 0.55
CD58P19256 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.49■□□□□ 0.55
CD58P19256 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 AP001094.4-201ENST00000579008 2176 ntBASIC18.49■□□□□ 0.55
CD58P19256 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.49■□□□□ 0.55
CD58P19256 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.49■□□□□ 0.55
CD58P19256 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD58P19256 NCF1C-201ENST00000438382 1427 ntBASIC18.49■□□□□ 0.55
CD58P19256 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CD58P19256 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.48■□□□□ 0.55
CD58P19256 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CD58P19256 MRPL3P1-201ENST00000400109 1033 ntBASIC18.48■□□□□ 0.55
CD58P19256 KRT18P67-201ENST00000432816 1264 ntBASIC18.48■□□□□ 0.55
CD58P19256 HNRNPDP1-201ENST00000439535 754 ntBASIC18.48■□□□□ 0.55
CD58P19256 AC009078.2-202ENST00000463353 338 ntBASIC18.48■□□□□ 0.55
CD58P19256 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CD58P19256 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CD58P19256 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CD58P19256 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.48■□□□□ 0.55
CD58P19256 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.48■□□□□ 0.55
CD58P19256 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CD58P19256 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.48■□□□□ 0.55
CD58P19256 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CD58P19256 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD58P19256 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms