Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.77■□□□□ 0.76
BMP3P12645 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.77■□□□□ 0.76
BMP3P12645 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.77■□□□□ 0.76
BMP3P12645 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.77■□□□□ 0.76
BMP3P12645 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.77■□□□□ 0.76
BMP3P12645 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.77■□□□□ 0.76
BMP3P12645 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.77■□□□□ 0.76
BMP3P12645 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.77■□□□□ 0.76
BMP3P12645 AC092902.6-201ENST00000641783 218 ntBASIC19.77■□□□□ 0.76
BMP3P12645 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.77■□□□□ 0.76
BMP3P12645 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BMP3P12645 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BMP3P12645 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BMP3P12645 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.77■□□□□ 0.75
BMP3P12645 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
BMP3P12645 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
BMP3P12645 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
BMP3P12645 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BMP3P12645 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.76■□□□□ 0.75
BMP3P12645 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BMP3P12645 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 AC068880.1-201ENST00000507289 2297 ntBASIC19.76■□□□□ 0.75
BMP3P12645 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.76■□□□□ 0.75
BMP3P12645 AC116353.5-201ENST00000638148 1699 ntBASIC19.76■□□□□ 0.75
BMP3P12645 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.76■□□□□ 0.75
BMP3P12645 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.76■□□□□ 0.75
BMP3P12645 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.76■□□□□ 0.75
BMP3P12645 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BMP3P12645 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.76■□□□□ 0.75
BMP3P12645 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 AL645728.2-201ENST00000641974 660 ntBASIC19.76■□□□□ 0.75
BMP3P12645 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
BMP3P12645 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BMP3P12645 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
BMP3P12645 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.75■□□□□ 0.75
BMP3P12645 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BMP3P12645 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
BMP3P12645 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.75■□□□□ 0.75
BMP3P12645 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.75■□□□□ 0.75
BMP3P12645 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
BMP3P12645 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.75■□□□□ 0.75
BMP3P12645 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
BMP3P12645 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.75■□□□□ 0.75
BMP3P12645 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.75■□□□□ 0.75
BMP3P12645 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.75■□□□□ 0.75
BMP3P12645 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BMP3P12645 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.75■□□□□ 0.75
BMP3P12645 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.74■□□□□ 0.75
BMP3P12645 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.74■□□□□ 0.75
BMP3P12645 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.74■□□□□ 0.75
BMP3P12645 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
BMP3P12645 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.74■□□□□ 0.75
BMP3P12645 CNN2P11-201ENST00000429351 262 ntBASIC19.74■□□□□ 0.75
BMP3P12645 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BMP3P12645 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.74■□□□□ 0.75
BMP3P12645 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BMP3P12645 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BMP3P12645 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms