Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRT3P12035 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRT3P12035 AC004817.3-201ENST00000602957 2129 ntBASIC18.16■□□□□ 0.5
KRT3P12035 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT3P12035 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT3P12035 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 RBM17P3-201ENST00000417687 1192 ntBASIC18.16■□□□□ 0.5
KRT3P12035 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT3P12035 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT3P12035 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT3P12035 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
KRT3P12035 AC097637.2-201ENST00000624096 1997 ntBASIC18.15■□□□□ 0.5
KRT3P12035 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
KRT3P12035 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT3P12035 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT3P12035 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
KRT3P12035 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT3P12035 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
KRT3P12035 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT3P12035 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
KRT3P12035 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
KRT3P12035 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT3P12035 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT3P12035 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT3P12035 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT3P12035 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT3P12035 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.14■□□□□ 0.49
KRT3P12035 ACTG1P4-201ENST00000425123 1122 ntBASIC18.14■□□□□ 0.49
KRT3P12035 PRYP5-201ENST00000451909 266 ntBASIC18.14■□□□□ 0.49
KRT3P12035 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KRT3P12035 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.14■□□□□ 0.49
KRT3P12035 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT3P12035 KRT18P56-201ENST00000507275 550 ntBASIC18.14■□□□□ 0.49
KRT3P12035 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT3P12035 MTDHP3-201ENST00000594186 672 ntBASIC18.14■□□□□ 0.49
KRT3P12035 CLEC4GP1-201ENST00000596555 870 ntBASIC18.14■□□□□ 0.49
KRT3P12035 LINC01711-201ENST00000598340 967 ntBASIC18.14■□□□□ 0.49
KRT3P12035 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT3P12035 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
KRT3P12035 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT3P12035 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT3P12035 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT3P12035 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
KRT3P12035 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT3P12035 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
KRT3P12035 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KRT3P12035 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT3P12035 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
KRT3P12035 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT3P12035 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT3P12035 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms