Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 STK25P1-201ENST00000585406 838 ntBASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 BNIP3P18-201ENST00000593976 575 ntBASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 AC011467.2-201ENST00000598425 242 ntBASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 AC092053.1-201ENST00000605787 1936 ntBASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
IGHV3-43DP0DP04 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IGHV3-43DP0DP04 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 AC106886.4-201ENST00000623557 2502 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 SLC25A1P3-201ENST00000395415 828 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 RCN1P2-201ENST00000398357 915 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 MIR1224-201ENST00000408193 85 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 AC104819.1-201ENST00000504587 486 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 MIR3180-1-201ENST00000580374 94 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 MIR3180-3-201ENST00000584616 94 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 AC010331.1-201ENST00000611423 582 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 AL121761.2-201ENST00000598007 1648 ntBASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IGHV3-43DP0DP04 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 AL353593.2-201ENST00000602529 1483 ntBASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
IGHV3-43DP0DP04 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms