Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
UBCP0CG48 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
UBCP0CG48 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.14■□□□□ 0.02
UBCP0CG48 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBCP0CG48 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 KRT18P57-201ENST00000443599 1254 ntBASIC15.14■□□□□ 0.01
UBCP0CG48 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.14■□□□□ 0.01
UBCP0CG48 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.14■□□□□ 0.01
UBCP0CG48 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.14■□□□□ 0.01
UBCP0CG48 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.14■□□□□ 0.01
UBCP0CG48 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 AC066615.1-201ENST00000640911 628 ntBASIC15.14■□□□□ 0.01
UBCP0CG48 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.14■□□□□ 0.01
UBCP0CG48 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 AC125634.1-201ENST00000438758 1403 ntBASIC15.14■□□□□ 0.01
UBCP0CG48 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UBCP0CG48 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
UBCP0CG48 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
UBCP0CG48 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBCP0CG48 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
UBCP0CG48 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 FAM220CP-201ENST00000395253 831 ntBASIC15.13■□□□□ 0.01
UBCP0CG48 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.13■□□□□ 0.01
UBCP0CG48 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.13■□□□□ 0.01
UBCP0CG48 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.13■□□□□ 0.01
UBCP0CG48 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.13■□□□□ 0.01
UBCP0CG48 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.13■□□□□ 0.01
UBCP0CG48 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 AC006011.2-201ENST00000621313 1158 ntBASIC15.13■□□□□ 0.01
UBCP0CG48 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 AC092053.1-201ENST00000605787 1936 ntBASIC15.13■□□□□ 0.01
UBCP0CG48 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.13■□□□□ 0.01
UBCP0CG48 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.13■□□□□ 0.01
UBCP0CG48 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBCP0CG48 AC103702.1-201ENST00000548801 2630 ntBASIC15.13■□□□□ 0.01
UBCP0CG48 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.12■□□□□ 0.01
UBCP0CG48 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms