Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD74P04233 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.49□□□□□ -0.09
CD74P04233 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CD74P04233 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.49□□□□□ -0.09
CD74P04233 AC010460.3-201ENST00000511359 1579 ntBASIC14.49□□□□□ -0.09
CD74P04233 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 AC006538.1-201ENST00000567905 1585 ntBASIC14.49□□□□□ -0.09
CD74P04233 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.49□□□□□ -0.09
CD74P04233 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CD74P04233 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.49□□□□□ -0.09
CD74P04233 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.49□□□□□ -0.09
CD74P04233 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.49□□□□□ -0.09
CD74P04233 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.49□□□□□ -0.09
CD74P04233 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.49□□□□□ -0.09
CD74P04233 AC104640.1-201ENST00000562617 2109 ntBASIC14.49□□□□□ -0.09
CD74P04233 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.49□□□□□ -0.09
CD74P04233 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 TMEM191A-211ENST00000637163 1067 ntBASIC14.49□□□□□ -0.09
CD74P04233 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.49□□□□□ -0.09
CD74P04233 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.49□□□□□ -0.09
CD74P04233 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.49□□□□□ -0.09
CD74P04233 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD74P04233 PAUPAR-201ENST00000630360 2965 ntBASIC14.49□□□□□ -0.09
CD74P04233 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD74P04233 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 ALOX12P2-203ENST00000570921 1945 ntBASIC14.49□□□□□ -0.09
CD74P04233 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD74P04233 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.48□□□□□ -0.09
CD74P04233 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.48□□□□□ -0.09
CD74P04233 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.48□□□□□ -0.09
CD74P04233 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CD74P04233 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.48□□□□□ -0.09
CD74P04233 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 INGX-201ENST00000359239 846 ntBASIC14.48□□□□□ -0.09
CD74P04233 AP000523.1-201ENST00000398242 1049 ntBASIC14.48□□□□□ -0.09
CD74P04233 AL390955.1-201ENST00000428694 934 ntBASIC14.48□□□□□ -0.09
CD74P04233 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CD74P04233 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 AP000525.1-201ENST00000608286 694 ntBASIC14.48□□□□□ -0.09
CD74P04233 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.48□□□□□ -0.09
CD74P04233 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.48□□□□□ -0.09
CD74P04233 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CD74P04233 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CD74P04233 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
CD74P04233 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CD74P04233 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CD74P04233 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CD74P04233 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CD74P04233 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 AC023824.1-201ENST00000562945 2975 ntBASIC14.47□□□□□ -0.09
CD74P04233 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms