Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA1P02708 GPS2P2-201ENST00000430745 888 ntBASIC18.6■□□□□ 0.57
CHRNA1P02708 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHRNA1P02708 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNA1P02708 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNA1P02708 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA1P02708 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA1P02708 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA1P02708 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA1P02708 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA1P02708 AC092474.2-201ENST00000424288 719 ntBASIC18.59■□□□□ 0.57
CHRNA1P02708 SPCS2P4-201ENST00000436160 681 ntBASIC18.59■□□□□ 0.57
CHRNA1P02708 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA1P02708 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA1P02708 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA1P02708 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.59■□□□□ 0.57
CHRNA1P02708 LINC01225-203ENST00000563550 1244 ntBASIC18.59■□□□□ 0.57
CHRNA1P02708 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.59■□□□□ 0.57
CHRNA1P02708 AL161645.1-201ENST00000622716 1255 ntBASIC18.59■□□□□ 0.57
CHRNA1P02708 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA1P02708 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA1P02708 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA1P02708 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA1P02708 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA1P02708 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.58■□□□□ 0.57
CHRNA1P02708 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.58■□□□□ 0.57
CHRNA1P02708 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA1P02708 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA1P02708 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CHRNA1P02708 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA1P02708 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CHRNA1P02708 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA1P02708 KRT18P32-201ENST00000424695 1287 ntBASIC18.58■□□□□ 0.56
CHRNA1P02708 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA1P02708 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA1P02708 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA1P02708 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA1P02708 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA1P02708 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA1P02708 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA1P02708 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA1P02708 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA1P02708 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHRNA1P02708 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA1P02708 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA1P02708 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA1P02708 AL353732.1-201ENST00000569618 1459 ntBASIC18.58■□□□□ 0.56
CHRNA1P02708 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA1P02708 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA1P02708 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA1P02708 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 SLC25A1P3-201ENST00000395415 828 ntBASIC18.57■□□□□ 0.56
CHRNA1P02708 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA1P02708 AL035633.1-201ENST00000406139 838 ntBASIC18.57■□□□□ 0.56
CHRNA1P02708 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA1P02708 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA1P02708 AL512356.2-201ENST00000546955 174 ntBASIC18.57■□□□□ 0.56
CHRNA1P02708 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA1P02708 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA1P02708 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.57■□□□□ 0.56
CHRNA1P02708 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA1P02708 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA1P02708 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
CHRNA1P02708 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA1P02708 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms