Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
MBD3O95983 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MBD3O95983 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MBD3O95983 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.77■□□□□ 0.75
MBD3O95983 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
MBD3O95983 FRMD8P1-201ENST00000440433 1524 ntBASIC19.76■□□□□ 0.75
MBD3O95983 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
MBD3O95983 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD3O95983 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.76■□□□□ 0.75
MBD3O95983 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 AC068472.1-201ENST00000474589 881 ntBASIC19.76■□□□□ 0.75
MBD3O95983 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 FAM87A-204ENST00000613235 858 ntBASIC19.76■□□□□ 0.75
MBD3O95983 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD3O95983 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MBD3O95983 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MBD3O95983 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.76■□□□□ 0.75
MBD3O95983 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD3O95983 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.75■□□□□ 0.75
MBD3O95983 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.75■□□□□ 0.75
MBD3O95983 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 MTHFR-217ENST00000641820 1569 ntBASIC19.75■□□□□ 0.75
MBD3O95983 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 ECEL1P3-201ENST00000427961 737 ntBASIC19.75■□□□□ 0.75
MBD3O95983 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.75■□□□□ 0.75
MBD3O95983 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 AC109462.3-201ENST00000573934 613 ntBASIC19.75■□□□□ 0.75
MBD3O95983 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.75■□□□□ 0.75
MBD3O95983 AC079602.3-201ENST00000623931 403 ntBASIC19.75■□□□□ 0.75
MBD3O95983 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
MBD3O95983 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
MBD3O95983 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3O95983 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3O95983 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MBD3O95983 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3O95983 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MBD3O95983 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MBD3O95983 AL391256.1-201ENST00000443260 1855 ntBASIC19.74■□□□□ 0.75
MBD3O95983 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3O95983 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3O95983 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms