Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 PHGDH-209ENST00000641074 1780 ntBASIC14.45□□□□□ -0.1
ABCA1O95477 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCA1O95477 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.45□□□□□ -0.1
ABCA1O95477 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCA1O95477 OR7E47P-204ENST00000575924 449 ntBASIC14.45□□□□□ -0.1
ABCA1O95477 AC138761.1-201ENST00000584393 385 ntBASIC14.45□□□□□ -0.1
ABCA1O95477 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 AL096828.2-201ENST00000567259 1965 ntBASIC14.44□□□□□ -0.1
ABCA1O95477 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 AL020989.1-201ENST00000422979 469 ntBASIC14.44□□□□□ -0.1
ABCA1O95477 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCA1O95477 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.44□□□□□ -0.1
ABCA1O95477 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.44□□□□□ -0.1
ABCA1O95477 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 AL049757.1-201ENST00000616842 1596 ntBASIC14.44□□□□□ -0.1
ABCA1O95477 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA1O95477 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCA1O95477 AC004461.1-201ENST00000412461 403 ntBASIC14.44□□□□□ -0.1
ABCA1O95477 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCA1O95477 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCA1O95477 AC010507.1-201ENST00000633895 436 ntBASIC14.44□□□□□ -0.1
ABCA1O95477 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA1O95477 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 LTB4R2-202ENST00000528054 3092 ntBASIC14.44□□□□□ -0.1
ABCA1O95477 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA1O95477 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ABCA1O95477 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 AC093677.2-201ENST00000600169 1863 ntBASIC14.43□□□□□ -0.1
ABCA1O95477 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
ABCA1O95477 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA1O95477 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCA1O95477 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.43□□□□□ -0.1
ABCA1O95477 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCA1O95477 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCA1O95477 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms