Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SIX6O95475 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SIX6O95475 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.46□□□□□ -0.1
SIX6O95475 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SIX6O95475 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX6O95475 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX6O95475 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 AC099063.4-201ENST00000641099 1602 ntBASIC14.45□□□□□ -0.1
SIX6O95475 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX6O95475 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 AC068587.6-202ENST00000641839 5619 ntBASIC14.45□□□□□ -0.1
SIX6O95475 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SIX6O95475 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.45□□□□□ -0.1
SIX6O95475 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 SLC29A4P1-201ENST00000398760 971 ntBASIC14.45□□□□□ -0.1
SIX6O95475 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.45□□□□□ -0.1
SIX6O95475 CROCCP5-201ENST00000436658 830 ntBASIC14.45□□□□□ -0.1
SIX6O95475 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.45□□□□□ -0.1
SIX6O95475 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SIX6O95475 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 AL023875.1-201ENST00000640777 796 ntBASIC14.45□□□□□ -0.1
SIX6O95475 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIX6O95475 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.45□□□□□ -0.1
SIX6O95475 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 AL365209.1-201ENST00000624418 6473 ntBASIC14.44□□□□□ -0.1
SIX6O95475 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 TCAF2P1-201ENST00000291129 2421 ntBASIC14.44□□□□□ -0.1
SIX6O95475 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX6O95475 KRT8P7-201ENST00000533003 1432 ntBASIC14.44□□□□□ -0.1
SIX6O95475 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 AC026185.1-201ENST00000445748 174 ntBASIC14.44□□□□□ -0.1
SIX6O95475 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 AP002982.1-201ENST00000492365 877 ntBASIC14.44□□□□□ -0.1
SIX6O95475 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 AC098934.4-201ENST00000564127 592 ntBASIC14.44□□□□□ -0.1
SIX6O95475 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.44□□□□□ -0.1
SIX6O95475 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.44□□□□□ -0.1
SIX6O95475 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 KRT8P47-201ENST00000604727 1398 ntBASIC14.44□□□□□ -0.1
SIX6O95475 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.44□□□□□ -0.1
SIX6O95475 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIX6O95475 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms