Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLSTN1O94985 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CLSTN1O94985 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
CLSTN1O94985 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.11■□□□□ 0.65
CLSTN1O94985 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 BX276092.7-203ENST00000637198 1536 ntBASIC19.11■□□□□ 0.65
CLSTN1O94985 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.11■□□□□ 0.65
CLSTN1O94985 AD000864.1-201ENST00000624076 2295 ntBASIC19.11■□□□□ 0.65
CLSTN1O94985 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLSTN1O94985 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.11■□□□□ 0.65
CLSTN1O94985 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.11■□□□□ 0.65
CLSTN1O94985 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.11■□□□□ 0.65
CLSTN1O94985 AC012313.10-201ENST00000623509 926 ntBASIC19.11■□□□□ 0.65
CLSTN1O94985 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.11■□□□□ 0.65
CLSTN1O94985 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
CLSTN1O94985 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.11■□□□□ 0.65
CLSTN1O94985 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLSTN1O94985 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
CLSTN1O94985 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 AC006116.8-202ENST00000587620 1550 ntBASIC19.1■□□□□ 0.65
CLSTN1O94985 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CLSTN1O94985 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLSTN1O94985 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLSTN1O94985 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.1■□□□□ 0.65
CLSTN1O94985 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.1■□□□□ 0.65
CLSTN1O94985 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.1■□□□□ 0.65
CLSTN1O94985 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.1■□□□□ 0.65
CLSTN1O94985 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.1■□□□□ 0.65
CLSTN1O94985 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.1■□□□□ 0.65
CLSTN1O94985 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 AL355312.1-201ENST00000407115 2176 ntBASIC19.1■□□□□ 0.65
CLSTN1O94985 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLSTN1O94985 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLSTN1O94985 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.1■□□□□ 0.65
CLSTN1O94985 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLSTN1O94985 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.09■□□□□ 0.65
CLSTN1O94985 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC19.09■□□□□ 0.65
CLSTN1O94985 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 AL513477.1-201ENST00000602865 2407 ntBASIC19.09■□□□□ 0.65
CLSTN1O94985 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CLSTN1O94985 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 AC007967.3-201ENST00000434308 558 ntBASIC19.09■□□□□ 0.65
CLSTN1O94985 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CLSTN1O94985 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.09■□□□□ 0.65
CLSTN1O94985 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.09■□□□□ 0.65
CLSTN1O94985 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.09■□□□□ 0.65
CLSTN1O94985 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLSTN1O94985 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CLSTN1O94985 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLSTN1O94985 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms