Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NDUFS3O75489 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NDUFS3O75489 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFS3O75489 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFS3O75489 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NDUFS3O75489 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFS3O75489 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 PRELID1P1-202ENST00000567272 903 ntBASIC17.19■□□□□ 0.34
NDUFS3O75489 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.19■□□□□ 0.34
NDUFS3O75489 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.19■□□□□ 0.34
NDUFS3O75489 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 AP005117.1-201ENST00000584346 1413 ntBASIC17.19■□□□□ 0.34
NDUFS3O75489 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFS3O75489 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFS3O75489 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 AC022211.2-201ENST00000585075 2527 ntBASIC17.18■□□□□ 0.34
NDUFS3O75489 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 AC148477.5-201ENST00000625164 1645 ntBASIC17.18■□□□□ 0.34
NDUFS3O75489 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NDUFS3O75489 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.18■□□□□ 0.34
NDUFS3O75489 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.18■□□□□ 0.34
NDUFS3O75489 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.18■□□□□ 0.34
NDUFS3O75489 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.18■□□□□ 0.34
NDUFS3O75489 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFS3O75489 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
NDUFS3O75489 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.18■□□□□ 0.34
NDUFS3O75489 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 AL732292.2-201ENST00000609649 430 ntBASIC17.18■□□□□ 0.34
NDUFS3O75489 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.18■□□□□ 0.34
NDUFS3O75489 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFS3O75489 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 PCDHA12-202ENST00000613593 2588 ntBASIC17.18■□□□□ 0.34
NDUFS3O75489 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFS3O75489 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NDUFS3O75489 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.17■□□□□ 0.34
NDUFS3O75489 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
NDUFS3O75489 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFS3O75489 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.17■□□□□ 0.34
NDUFS3O75489 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.17■□□□□ 0.34
NDUFS3O75489 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFS3O75489 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NDUFS3O75489 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NDUFS3O75489 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 EGFEM1P-202ENST00000431685 1563 ntBASIC17.17■□□□□ 0.34
NDUFS3O75489 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFS3O75489 AC060834.1-201ENST00000443027 2032 ntBASIC17.17■□□□□ 0.34
NDUFS3O75489 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFS3O75489 SIGLEC16-201ENST00000599858 1437 ntBASIC17.17■□□□□ 0.34
NDUFS3O75489 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 AP001269.4-201ENST00000609611 512 ntBASIC17.17■□□□□ 0.34
NDUFS3O75489 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.17■□□□□ 0.34
NDUFS3O75489 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 AC079776.2-201ENST00000641154 1609 ntBASIC17.17■□□□□ 0.34
NDUFS3O75489 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFS3O75489 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms