Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.01■□□□□ 0.47
OPHN1O60890 ZNF259P1-201ENST00000407656 1365 ntBASIC18.01■□□□□ 0.47
OPHN1O60890 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.01■□□□□ 0.47
OPHN1O60890 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPHN1O60890 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
OPHN1O60890 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 LYSMD4-203ENST00000378904 2122 ntBASIC18■□□□□ 0.47
OPHN1O60890 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18■□□□□ 0.47
OPHN1O60890 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18■□□□□ 0.47
OPHN1O60890 RPL13AP23-201ENST00000480739 586 ntBASIC18■□□□□ 0.47
OPHN1O60890 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 AC096582.2-201ENST00000510860 516 ntBASIC18■□□□□ 0.47
OPHN1O60890 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18■□□□□ 0.47
OPHN1O60890 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18■□□□□ 0.47
OPHN1O60890 BNIP3P18-201ENST00000593976 575 ntBASIC18■□□□□ 0.47
OPHN1O60890 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18■□□□□ 0.47
OPHN1O60890 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18■□□□□ 0.47
OPHN1O60890 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
OPHN1O60890 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPHN1O60890 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
OPHN1O60890 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
OPHN1O60890 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
OPHN1O60890 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.99■□□□□ 0.47
OPHN1O60890 AC073648.2-201ENST00000510116 352 ntBASIC17.99■□□□□ 0.47
OPHN1O60890 AC139887.3-201ENST00000568585 713 ntBASIC17.99■□□□□ 0.47
OPHN1O60890 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.99■□□□□ 0.47
OPHN1O60890 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 AC243591.1-201ENST00000452967 1364 ntBASIC17.99■□□□□ 0.47
OPHN1O60890 PKD1P5-201ENST00000532415 10291 ntBASIC17.99■□□□□ 0.47
OPHN1O60890 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
OPHN1O60890 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.99■□□□□ 0.47
OPHN1O60890 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
OPHN1O60890 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
OPHN1O60890 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 AC016396.2-201ENST00000562575 1417 ntBASIC17.98■□□□□ 0.47
OPHN1O60890 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.98■□□□□ 0.47
OPHN1O60890 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
OPHN1O60890 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
OPHN1O60890 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.98■□□□□ 0.47
OPHN1O60890 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms