Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.93■■□□□ 1.1
KCNQ3O43525 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ3O43525 AC002056.1-201ENST00000395613 760 ntBASIC21.93■■□□□ 1.1
KCNQ3O43525 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.93■■□□□ 1.1
KCNQ3O43525 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.93■■□□□ 1.1
KCNQ3O43525 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
KCNQ3O43525 HLA-J-203ENST00000494367 1087 ntBASIC21.93■■□□□ 1.1
KCNQ3O43525 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNQ3O43525 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.93■■□□□ 1.1
KCNQ3O43525 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNQ3O43525 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNQ3O43525 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.93■■□□□ 1.1
KCNQ3O43525 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.93■■□□□ 1.1
KCNQ3O43525 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ3O43525 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.93■■□□□ 1.1
KCNQ3O43525 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ3O43525 AC116353.5-201ENST00000638148 1699 ntBASIC21.93■■□□□ 1.1
KCNQ3O43525 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ3O43525 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
KCNQ3O43525 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
KCNQ3O43525 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ3O43525 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ3O43525 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
KCNQ3O43525 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ3O43525 AC026120.1-201ENST00000611536 926 ntBASIC21.92■■□□□ 1.1
KCNQ3O43525 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 NOC2LP2-201ENST00000407594 1944 ntBASIC21.92■■□□□ 1.1
KCNQ3O43525 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ3O43525 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ3O43525 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.92■■□□□ 1.1
KCNQ3O43525 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNQ3O43525 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNQ3O43525 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNQ3O43525 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.91■■□□□ 1.1
KCNQ3O43525 FAM58DP-201ENST00000428076 619 ntBASIC21.91■■□□□ 1.1
KCNQ3O43525 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNQ3O43525 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNQ3O43525 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
KCNQ3O43525 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.91■■□□□ 1.1
KCNQ3O43525 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.91■■□□□ 1.1
KCNQ3O43525 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.91■■□□□ 1.1
KCNQ3O43525 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.91■■□□□ 1.1
KCNQ3O43525 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNQ3O43525 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KCNQ3O43525 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KCNQ3O43525 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNQ3O43525 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNQ3O43525 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNQ3O43525 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNQ3O43525 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
KCNQ3O43525 FRMD8P1-201ENST00000440433 1524 ntBASIC21.9■■□□□ 1.1
KCNQ3O43525 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.9■■□□□ 1.1
KCNQ3O43525 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.9■■□□□ 1.1
KCNQ3O43525 TFAMP1-201ENST00000412727 736 ntBASIC21.9■■□□□ 1.1
KCNQ3O43525 AL627223.1-201ENST00000416693 442 ntBASIC21.9■■□□□ 1.1
KCNQ3O43525 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNQ3O43525 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.9■■□□□ 1.1
KCNQ3O43525 AC023141.5-201ENST00000458585 616 ntBASIC21.9■■□□□ 1.1
KCNQ3O43525 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.9■■□□□ 1.1
KCNQ3O43525 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.9■■□□□ 1.1
KCNQ3O43525 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.9■■□□□ 1.1
KCNQ3O43525 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNQ3O43525 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
KCNQ3O43525 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNQ3O43525 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
KCNQ3O43525 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNQ3O43525 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.89■■□□□ 1.1
KCNQ3O43525 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
KCNQ3O43525 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNQ3O43525 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KCNQ3O43525 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.89■■□□□ 1.1
KCNQ3O43525 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNQ3O43525 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
KCNQ3O43525 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNQ3O43525 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KCNQ3O43525 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNQ3O43525 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KCNQ3O43525 AC079140.1-201ENST00000508039 487 ntBASIC21.89■■□□□ 1.09
KCNQ3O43525 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms