Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
UBFD1O14562 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
UBFD1O14562 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
UBFD1O14562 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.71■□□□□ 0.27
UBFD1O14562 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.71■□□□□ 0.27
UBFD1O14562 KLF4P1-201ENST00000412782 1185 ntBASIC16.71■□□□□ 0.27
UBFD1O14562 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.71■□□□□ 0.27
UBFD1O14562 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
UBFD1O14562 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 AL121672.3-201ENST00000608644 468 ntBASIC16.71■□□□□ 0.27
UBFD1O14562 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 AC233702.3-201ENST00000578656 1387 ntBASIC16.71■□□□□ 0.27
UBFD1O14562 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBFD1O14562 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBFD1O14562 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
UBFD1O14562 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBFD1O14562 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBFD1O14562 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBFD1O14562 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 AC148477.5-201ENST00000625164 1645 ntBASIC16.7■□□□□ 0.26
UBFD1O14562 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.7■□□□□ 0.26
UBFD1O14562 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.7■□□□□ 0.26
UBFD1O14562 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 AP002383.4-201ENST00000442518 975 ntBASIC16.7■□□□□ 0.26
UBFD1O14562 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.7■□□□□ 0.26
UBFD1O14562 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.7■□□□□ 0.26
UBFD1O14562 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
UBFD1O14562 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.7■□□□□ 0.26
UBFD1O14562 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
UBFD1O14562 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 INTS4P1-201ENST00000438455 1935 ntBASIC16.7■□□□□ 0.26
UBFD1O14562 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
UBFD1O14562 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.7■□□□□ 0.26
UBFD1O14562 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.7■□□□□ 0.26
UBFD1O14562 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBFD1O14562 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 PMPCAP1-201ENST00000508114 1576 ntBASIC16.69■□□□□ 0.26
UBFD1O14562 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
UBFD1O14562 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.69■□□□□ 0.26
UBFD1O14562 VENTXP7-201ENST00000475503 772 ntBASIC16.69■□□□□ 0.26
UBFD1O14562 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBFD1O14562 BNIP3P18-201ENST00000593976 575 ntBASIC16.69■□□□□ 0.26
UBFD1O14562 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.69■□□□□ 0.26
UBFD1O14562 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms