Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC25.22■■□□□ 1.63
HFM1A2PYH4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
HFM1A2PYH4 MTRF1LP2-201ENST00000506027 1122 ntBASIC25.22■■□□□ 1.63
HFM1A2PYH4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC25.22■■□□□ 1.63
HFM1A2PYH4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.22■■□□□ 1.63
HFM1A2PYH4 CEP83-AS1-201ENST00000623122 2482 ntBASIC25.22■■□□□ 1.63
HFM1A2PYH4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC25.22■■□□□ 1.63
HFM1A2PYH4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HFM1A2PYH4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.22■■□□□ 1.63
HFM1A2PYH4 LINC00895-201ENST00000629028 1637 ntBASIC25.22■■□□□ 1.63
HFM1A2PYH4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 AC012569.1-201ENST00000591191 1524 ntBASIC25.21■■□□□ 1.63
HFM1A2PYH4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HFM1A2PYH4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC25.21■■□□□ 1.63
HFM1A2PYH4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
HFM1A2PYH4 ACTG1P14-201ENST00000446382 1122 ntBASIC25.2■■□□□ 1.63
HFM1A2PYH4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 DNAJB3-202ENST00000449667 1266 ntBASIC25.2■■□□□ 1.63
HFM1A2PYH4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
HFM1A2PYH4 AC087641.1-201ENST00000557561 1021 ntBASIC25.2■■□□□ 1.63
HFM1A2PYH4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 AL009183.1-201ENST00000603760 355 ntBASIC25.2■■□□□ 1.63
HFM1A2PYH4 AC013467.2-201ENST00000605472 835 ntBASIC25.2■■□□□ 1.63
HFM1A2PYH4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC25.2■■□□□ 1.63
HFM1A2PYH4 AC092068.3-201ENST00000587894 2016 ntBASIC25.2■■□□□ 1.63
HFM1A2PYH4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
HFM1A2PYH4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
HFM1A2PYH4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
HFM1A2PYH4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HFM1A2PYH4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HFM1A2PYH4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HFM1A2PYH4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HFM1A2PYH4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
HFM1A2PYH4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 AC211486.1-202ENST00000416371 468 ntBASIC25.19■■□□□ 1.62
HFM1A2PYH4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 AC211476.1-201ENST00000503899 468 ntBASIC25.19■■□□□ 1.62
HFM1A2PYH4 AC112191.1-201ENST00000523689 701 ntBASIC25.19■■□□□ 1.62
HFM1A2PYH4 CYP2A7P1-201ENST00000595391 815 ntBASIC25.19■■□□□ 1.62
HFM1A2PYH4 SIGLEC29P-201ENST00000599873 1114 ntBASIC25.19■■□□□ 1.62
HFM1A2PYH4 AL031055.1-201ENST00000606362 631 ntBASIC25.19■■□□□ 1.62
HFM1A2PYH4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HFM1A2PYH4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
HFM1A2PYH4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms