Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AL590627.1-203ENST00000421194 1026 ntBASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KRT18P67-201ENST00000432816 1264 ntBASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AL031284.1-201ENST00000419297 478 ntBASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AP000347.1-202ENST00000435868 847 ntBASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRBV4S1A1TA0A5B7 RPS2P28-201ENST00000314255 741 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms