Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 YBX1P5-201ENST00000509441 847 ntBASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 AC016396.2-201ENST00000562575 1417 ntBASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
TRGV5A0A0B4J1U4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 DNAJB3-202ENST00000449667 1266 ntBASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ACTL9-202ENST00000612068 1252 ntBASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRGV5A0A0B4J1U4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 FAM58CP-201ENST00000435741 640 ntBASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 AP006288.1-201ENST00000446065 395 ntBASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 CEND1P1-201ENST00000451006 455 ntBASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 SNHG9-202ENST00000564014 471 ntBASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms