Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC092850.2-201ENST00000623821 2697 ntBASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 RNF216P1-203ENST00000404404 2427 ntBASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC092053.1-201ENST00000605787 1936 ntBASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRBV6-7A0A0A0MS04 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC005521.1-201ENST00000393351 872 ntBASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC109462.3-201ENST00000573934 613 ntBASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC073912.3-201ENST00000624414 853 ntBASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-7A0A0A0MS04 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 AK4P3-201ENST00000418260 669 ntBASIC14.42□□□□□ -0.1
TRBV6-7A0A0A0MS04 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms