Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HINT3Q9NQE9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HINT3Q9NQE9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HINT3Q9NQE9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
HINT3Q9NQE9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HINT3Q9NQE9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HINT3Q9NQE9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HINT3Q9NQE9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HINT3Q9NQE9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HINT3Q9NQE9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HINT3Q9NQE9 AC096887.2-201ENST00000623443 1957 ntBASIC21.78■■□□□ 1.08
HINT3Q9NQE9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
HINT3Q9NQE9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
HINT3Q9NQE9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HINT3Q9NQE9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.77■■□□□ 1.07
HINT3Q9NQE9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HINT3Q9NQE9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HINT3Q9NQE9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HINT3Q9NQE9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HINT3Q9NQE9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HINT3Q9NQE9 AC022211.4-201ENST00000625094 2161 ntBASIC21.75■■□□□ 1.07
HINT3Q9NQE9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 MIR4449-201ENST00000578365 66 ntBASIC21.75■■□□□ 1.07
HINT3Q9NQE9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HINT3Q9NQE9 MIR219A2-201ENST00000608502 1504 ntBASIC21.75■■□□□ 1.07
HINT3Q9NQE9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
HINT3Q9NQE9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HINT3Q9NQE9 AC138932.3-201ENST00000567634 1902 ntBASIC21.73■■□□□ 1.07
HINT3Q9NQE9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HINT3Q9NQE9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HINT3Q9NQE9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.73■■□□□ 1.07
HINT3Q9NQE9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 AC008813.1-201ENST00000536597 885 ntBASIC21.72■■□□□ 1.07
HINT3Q9NQE9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HINT3Q9NQE9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HINT3Q9NQE9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
HINT3Q9NQE9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HINT3Q9NQE9 AC148477.6-201ENST00000623746 465 ntBASIC21.71■■□□□ 1.07
HINT3Q9NQE9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HINT3Q9NQE9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.7■■□□□ 1.07
HINT3Q9NQE9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HINT3Q9NQE9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.7■■□□□ 1.06
HINT3Q9NQE9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HINT3Q9NQE9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HINT3Q9NQE9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HINT3Q9NQE9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.7■■□□□ 1.06
HINT3Q9NQE9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HINT3Q9NQE9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.69■■□□□ 1.06
HINT3Q9NQE9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HINT3Q9NQE9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.69■■□□□ 1.06
HINT3Q9NQE9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HINT3Q9NQE9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HINT3Q9NQE9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HINT3Q9NQE9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 AL139125.2-201ENST00000623134 1869 ntBASIC21.67■■□□□ 1.06
HINT3Q9NQE9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HINT3Q9NQE9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.66■■□□□ 1.06
HINT3Q9NQE9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HINT3Q9NQE9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.66■■□□□ 1.06
HINT3Q9NQE9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.66■■□□□ 1.06
HINT3Q9NQE9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HINT3Q9NQE9 AL359504.2-201ENST00000605506 1601 ntBASIC21.66■■□□□ 1.06
HINT3Q9NQE9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 AL359258.2-201ENST00000564063 1566 ntBASIC21.65■■□□□ 1.06
HINT3Q9NQE9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.65■■□□□ 1.06
HINT3Q9NQE9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms