Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 AL139125.2-201ENST00000623134 1869 ntBASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.05■□□□□ 0.16
SND1-IT1Q9HBX3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 WHAMMP3-201ENST00000611636 1609 ntBASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SND1-IT1Q9HBX3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 AC110285.7-201ENST00000624417 1536 ntBASIC16.03■□□□□ 0.16
SND1-IT1Q9HBX3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SND1-IT1Q9HBX3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SND1-IT1Q9HBX3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SND1-IT1Q9HBX3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SND1-IT1Q9HBX3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SND1-IT1Q9HBX3 DUX4L28-201ENST00000623687 678 ntBASIC16.02■□□□□ 0.16
SND1-IT1Q9HBX3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SND1-IT1Q9HBX3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SND1-IT1Q9HBX3 AC022211.4-201ENST00000625094 2161 ntBASIC16.02■□□□□ 0.15
SND1-IT1Q9HBX3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 AC138932.3-201ENST00000567634 1902 ntBASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SND1-IT1Q9HBX3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16■□□□□ 0.15
SND1-IT1Q9HBX3 AC133561.1-201ENST00000568600 2415 ntBASIC16■□□□□ 0.15
SND1-IT1Q9HBX3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SND1-IT1Q9HBX3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16■□□□□ 0.15
SND1-IT1Q9HBX3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SND1-IT1Q9HBX3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SND1-IT1Q9HBX3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SND1-IT1Q9HBX3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.98■□□□□ 0.15
SND1-IT1Q9HBX3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 AC012676.1-201ENST00000574705 1949 ntBASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SND1-IT1Q9HBX3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 MIR3665-201ENST00000578708 105 ntBASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC15.96■□□□□ 0.15
SND1-IT1Q9HBX3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms