Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPH1Q70E73 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPH1Q70E73 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.15■■□□□ 1.46
RAPH1Q70E73 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPH1Q70E73 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPH1Q70E73 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.15■■□□□ 1.46
RAPH1Q70E73 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RAPH1Q70E73 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.14■■□□□ 1.45
RAPH1Q70E73 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPH1Q70E73 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPH1Q70E73 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RAPH1Q70E73 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RAPH1Q70E73 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPH1Q70E73 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPH1Q70E73 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.13■■□□□ 1.45
RAPH1Q70E73 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPH1Q70E73 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAPH1Q70E73 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAPH1Q70E73 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.12■■□□□ 1.45
RAPH1Q70E73 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAPH1Q70E73 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAPH1Q70E73 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAPH1Q70E73 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RAPH1Q70E73 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RAPH1Q70E73 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAPH1Q70E73 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAPH1Q70E73 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.1■■□□□ 1.45
RAPH1Q70E73 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAPH1Q70E73 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RAPH1Q70E73 AL359504.2-201ENST00000605506 1601 ntBASIC24.1■■□□□ 1.45
RAPH1Q70E73 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
RAPH1Q70E73 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAPH1Q70E73 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAPH1Q70E73 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.09■■□□□ 1.45
RAPH1Q70E73 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAPH1Q70E73 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAPH1Q70E73 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RAPH1Q70E73 CR559946.2-201ENST00000623684 991 ntBASIC24.08■■□□□ 1.45
RAPH1Q70E73 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
RAPH1Q70E73 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
RAPH1Q70E73 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAPH1Q70E73 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RAPH1Q70E73 ABHD17AP4-201ENST00000411545 909 ntBASIC24.07■■□□□ 1.44
RAPH1Q70E73 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAPH1Q70E73 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
RAPH1Q70E73 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAPH1Q70E73 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPH1Q70E73 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
RAPH1Q70E73 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPH1Q70E73 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPH1Q70E73 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPH1Q70E73 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RAPH1Q70E73 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
RAPH1Q70E73 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.05■■□□□ 1.44
RAPH1Q70E73 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPH1Q70E73 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.05■■□□□ 1.44
RAPH1Q70E73 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAPH1Q70E73 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RAPH1Q70E73 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RAPH1Q70E73 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RAPH1Q70E73 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RAPH1Q70E73 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
RAPH1Q70E73 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RAPH1Q70E73 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.03■■□□□ 1.44
RAPH1Q70E73 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
RAPH1Q70E73 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RAPH1Q70E73 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RAPH1Q70E73 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RAPH1Q70E73 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RAPH1Q70E73 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 AC126177.7-201ENST00000547904 679 ntBASIC24.02■■□□□ 1.44
RAPH1Q70E73 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RAPH1Q70E73 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.02■■□□□ 1.44
RAPH1Q70E73 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
RAPH1Q70E73 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.01■■□□□ 1.43
RAPH1Q70E73 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RAPH1Q70E73 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.01■■□□□ 1.43
RAPH1Q70E73 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RAPH1Q70E73 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAPH1Q70E73 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPH1Q70E73 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPH1Q70E73 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RAPH1Q70E73 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RAPH1Q70E73 AC096887.2-201ENST00000623443 1957 ntBASIC24■■□□□ 1.43
RAPH1Q70E73 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.99■■□□□ 1.43
RAPH1Q70E73 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPH1Q70E73 MIR3648-2-201ENST00000581792 180 ntBASIC23.99■■□□□ 1.43
RAPH1Q70E73 MIR3648-1-201ENST00000615959 180 ntBASIC23.99■■□□□ 1.43
RAPH1Q70E73 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPH1Q70E73 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPH1Q70E73 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPH1Q70E73 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPH1Q70E73 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPH1Q70E73 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RAPH1Q70E73 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms