Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPNS3Q6ZMD2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPNS3Q6ZMD2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SPNS3Q6ZMD2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 MIR4787-201ENST00000607364 84 ntBASIC20.85■□□□□ 0.93
SPNS3Q6ZMD2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPNS3Q6ZMD2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPNS3Q6ZMD2 KRT16P3-201ENST00000439127 1283 ntBASIC20.84■□□□□ 0.93
SPNS3Q6ZMD2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPNS3Q6ZMD2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.84■□□□□ 0.93
SPNS3Q6ZMD2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.84■□□□□ 0.93
SPNS3Q6ZMD2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SPNS3Q6ZMD2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SPNS3Q6ZMD2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 AC142086.6-201ENST00000621154 1765 ntBASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 UNC93B8-201ENST00000511903 705 ntBASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPNS3Q6ZMD2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPNS3Q6ZMD2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPNS3Q6ZMD2 AC005837.3-201ENST00000612163 286 ntBASIC20.81■□□□□ 0.92
SPNS3Q6ZMD2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPNS3Q6ZMD2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.81■□□□□ 0.92
SPNS3Q6ZMD2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 BX664725.1-201ENST00000438252 379 ntBASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPNS3Q6ZMD2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPNS3Q6ZMD2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPNS3Q6ZMD2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPNS3Q6ZMD2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.79■□□□□ 0.92
SPNS3Q6ZMD2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPNS3Q6ZMD2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPNS3Q6ZMD2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPNS3Q6ZMD2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.77■□□□□ 0.92
SPNS3Q6ZMD2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.77■□□□□ 0.92
SPNS3Q6ZMD2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPNS3Q6ZMD2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.77■□□□□ 0.92
SPNS3Q6ZMD2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPNS3Q6ZMD2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPNS3Q6ZMD2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms