Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.97■■□□□ 1.11
NIPAL3Q6P499 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.97■■□□□ 1.11
NIPAL3Q6P499 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.97■■□□□ 1.11
NIPAL3Q6P499 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.96■■□□□ 1.11
NIPAL3Q6P499 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.96■■□□□ 1.11
NIPAL3Q6P499 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NIPAL3Q6P499 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NIPAL3Q6P499 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
NIPAL3Q6P499 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NIPAL3Q6P499 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.94■■□□□ 1.1
NIPAL3Q6P499 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.94■■□□□ 1.1
NIPAL3Q6P499 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
NIPAL3Q6P499 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NIPAL3Q6P499 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.93■■□□□ 1.1
NIPAL3Q6P499 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NIPAL3Q6P499 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NIPAL3Q6P499 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NIPAL3Q6P499 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NIPAL3Q6P499 AC010501.1-201ENST00000606270 1962 ntBASIC21.93■■□□□ 1.1
NIPAL3Q6P499 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NIPAL3Q6P499 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NIPAL3Q6P499 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NIPAL3Q6P499 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NIPAL3Q6P499 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NIPAL3Q6P499 AC022413.1-201ENST00000624602 984 ntBASIC21.92■■□□□ 1.1
NIPAL3Q6P499 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NIPAL3Q6P499 AC093323.1-202ENST00000635031 2045 ntBASIC21.92■■□□□ 1.1
NIPAL3Q6P499 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
NIPAL3Q6P499 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NIPAL3Q6P499 ERN1-208ENST00000606895 2068 ntBASIC21.91■■□□□ 1.1
NIPAL3Q6P499 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NIPAL3Q6P499 AC060814.1-201ENST00000554326 538 ntBASIC21.91■■□□□ 1.1
NIPAL3Q6P499 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
NIPAL3Q6P499 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NIPAL3Q6P499 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NIPAL3Q6P499 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NIPAL3Q6P499 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NIPAL3Q6P499 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
NIPAL3Q6P499 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NIPAL3Q6P499 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.89■■□□□ 1.09
NIPAL3Q6P499 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NIPAL3Q6P499 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NIPAL3Q6P499 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NIPAL3Q6P499 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NIPAL3Q6P499 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NIPAL3Q6P499 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.87■■□□□ 1.09
NIPAL3Q6P499 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NIPAL3Q6P499 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.87■■□□□ 1.09
NIPAL3Q6P499 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NIPAL3Q6P499 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NIPAL3Q6P499 GPX1-201ENST00000419349 1106 ntBASIC21.86■■□□□ 1.09
NIPAL3Q6P499 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NIPAL3Q6P499 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.86■■□□□ 1.09
NIPAL3Q6P499 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NIPAL3Q6P499 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NIPAL3Q6P499 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.86■■□□□ 1.09
NIPAL3Q6P499 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NIPAL3Q6P499 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
NIPAL3Q6P499 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NIPAL3Q6P499 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPAL3Q6P499 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NIPAL3Q6P499 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NIPAL3Q6P499 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NIPAL3Q6P499 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NIPAL3Q6P499 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NIPAL3Q6P499 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NIPAL3Q6P499 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.83■■□□□ 1.09
NIPAL3Q6P499 AL359504.2-201ENST00000605506 1601 ntBASIC21.83■■□□□ 1.08
NIPAL3Q6P499 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NIPAL3Q6P499 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
NIPAL3Q6P499 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPAL3Q6P499 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPAL3Q6P499 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NIPAL3Q6P499 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.82■■□□□ 1.08
NIPAL3Q6P499 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NIPAL3Q6P499 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.81■■□□□ 1.08
NIPAL3Q6P499 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms