Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 CTR2YHR175W 570 nt7.01□□□□□ -1.29
SUB1P54000 VAN1YML115C 1608 nt7.01□□□□□ -1.29
SUB1P54000 YML133CYML133C 4125 nt7□□□□□ -1.29
SUB1P54000 MPP10YJR002W 1782 nt7□□□□□ -1.29
SUB1P54000 FLC3YGL139W 2409 nt7□□□□□ -1.29
SUB1P54000 TSR3YOR006C 942 nt7□□□□□ -1.29
SUB1P54000 AVT4YNL101W 2142 nt7□□□□□ -1.29
SUB1P54000 YMD8YML038C 1329 nt7□□□□□ -1.29
SUB1P54000 HMLALPHA1YCL066W 528 nt6.99□□□□□ -1.29
SUB1P54000 MATALPHA1YCR040W 528 nt6.99□□□□□ -1.29
SUB1P54000 TRS31YDR472W 852 nt6.99□□□□□ -1.29
SUB1P54000 YFL013W-AYFL013W-A 804 nt6.99□□□□□ -1.29
SUB1P54000 YGL081WYGL081W 963 nt6.99□□□□□ -1.29
SUB1P54000 SKI6YGR195W 741 nt6.99□□□□□ -1.29
SUB1P54000 TAD2YJL035C 753 nt6.99□□□□□ -1.29
SUB1P54000 NUP53YMR153W 1428 nt6.99□□□□□ -1.29
SUB1P54000 DML1YMR211W 1428 nt6.99□□□□□ -1.29
SUB1P54000 PHO3YBR092C 1404 nt6.99□□□□□ -1.29
SUB1P54000 NUD1YOR373W 2556 nt6.99□□□□□ -1.29
SUB1P54000 RNR3YIL066C 2610 nt6.98□□□□□ -1.29
SUB1P54000 NAF1YNL124W 1479 nt6.98□□□□□ -1.29
SUB1P54000 CDS1YBR029C 1374 nt6.98□□□□□ -1.29
SUB1P54000 CSM2YIL132C 642 nt6.98□□□□□ -1.29
SUB1P54000 YJR107WYJR107W 987 nt6.98□□□□□ -1.29
SUB1P54000 MID2YLR332W 1131 nt6.98□□□□□ -1.29
SUB1P54000 SLG1YOR008C 1137 nt6.98□□□□□ -1.29
SUB1P54000 HOF1YMR032W 2010 nt6.98□□□□□ -1.29
SUB1P54000 YEF1YEL041W 1488 nt6.98□□□□□ -1.29
SUB1P54000 YPR204WYPR204W 3099 nt6.97□□□□□ -1.29
SUB1P54000 FCY22YER060W-A 1593 nt6.97□□□□□ -1.29
SUB1P54000 YJL144WYJL144W 315 nt6.97□□□□□ -1.29
SUB1P54000 PAM17YKR065C 594 nt6.97□□□□□ -1.29
SUB1P54000 ADD37YMR184W 597 nt6.97□□□□□ -1.29
SUB1P54000 FHL1YPR104C 2811 nt6.96□□□□□ -1.29
SUB1P54000 ALT1YLR089C 1779 nt6.96□□□□□ -1.3
SUB1P54000 RTT103YDR289C 1230 nt6.96□□□□□ -1.3
SUB1P54000 CBR1YIL043C 855 nt6.96□□□□□ -1.3
SUB1P54000 MTF1YMR228W 1026 nt6.96□□□□□ -1.3
SUB1P54000 TOS6YNL300W 309 nt6.96□□□□□ -1.3
SUB1P54000 ENV9YOR246C 993 nt6.96□□□□□ -1.3
SUB1P54000 MSI1YBR195C 1269 nt6.96□□□□□ -1.3
SUB1P54000 RHO3YIL118W 696 nt6.95□□□□□ -1.3
SUB1P54000 PDR16YNL231C 1056 nt6.95□□□□□ -1.3
SUB1P54000 RTC4YNL254C 1206 nt6.95□□□□□ -1.3
SUB1P54000 LSG1YGL099W 1923 nt6.95□□□□□ -1.3
SUB1P54000 CEF1YMR213W 1773 nt6.95□□□□□ -1.3
SUB1P54000 ILV1YER086W 1731 nt6.94□□□□□ -1.3
SUB1P54000 GCN3YKR026C 918 nt6.94□□□□□ -1.3
SUB1P54000 CUE4YML101C 354 nt6.94□□□□□ -1.3
SUB1P54000 GDH1YOR375C 1365 nt6.94□□□□□ -1.3
SUB1P54000 MIP1YOR330C 3765 nt6.93□□□□□ -1.3
SUB1P54000 COX20YDR231C 618 nt6.93□□□□□ -1.3
SUB1P54000 ADE1YAR015W 921 nt6.93□□□□□ -1.3
SUB1P54000 YML122CYML122C 381 nt6.93□□□□□ -1.3
SUB1P54000 ATP23YNR020C 813 nt6.93□□□□□ -1.3
SUB1P54000 CKA2YOR061W 1020 nt6.93□□□□□ -1.3
SUB1P54000 SUE1YPR151C 621 nt6.93□□□□□ -1.3
SUB1P54000 GAS3YMR215W 1575 nt6.93□□□□□ -1.3
SUB1P54000 GIP1YBR045C 1920 nt6.93□□□□□ -1.3
SUB1P54000 ARG81YML099C 2643 nt6.93□□□□□ -1.3
SUB1P54000 RSM10YDR041W 612 nt6.92□□□□□ -1.3
SUB1P54000 AIM33YML087C 939 nt6.92□□□□□ -1.3
SUB1P54000 HEM15YOR176W 1182 nt6.92□□□□□ -1.3
SUB1P54000 KTR5YNL029C 1569 nt6.91□□□□□ -1.3
SUB1P54000 VBA1YMR088C 1689 nt6.91□□□□□ -1.3
SUB1P54000 YEA6YEL006W 1008 nt6.91□□□□□ -1.3
SUB1P54000 RPL31BYLR406C 342 nt6.91□□□□□ -1.3
SUB1P54000 TUL1YKL034W 2277 nt6.9□□□□□ -1.3
SUB1P54000 YDL177CYDL177C 513 nt6.9□□□□□ -1.3
SUB1P54000 YDR476CYDR476C 675 nt6.9□□□□□ -1.3
SUB1P54000 HIS1YER055C 894 nt6.9□□□□□ -1.3
SUB1P54000 ICT1YLR099C 1185 nt6.9□□□□□ -1.3
SUB1P54000 SEC13YLR208W 894 nt6.9□□□□□ -1.3
SUB1P54000 YJR124CYJR124C 1347 nt6.9□□□□□ -1.3
SUB1P54000 SES1YDR023W 1389 nt6.9□□□□□ -1.31
SUB1P54000 NFS1YCL017C 1494 nt6.9□□□□□ -1.31
SUB1P54000 HST4YDR191W 1113 nt6.89□□□□□ -1.31
SUB1P54000 YDR415CYDR415C 1125 nt6.89□□□□□ -1.31
SUB1P54000 ECM14YHR132C 1293 nt6.89□□□□□ -1.31
SUB1P54000 REC107YJR021C 945 nt6.89□□□□□ -1.31
SUB1P54000 DFG5YMR238W 1377 nt6.89□□□□□ -1.31
SUB1P54000 HEM1YDR232W 1647 nt6.88□□□□□ -1.31
SUB1P54000 DOC1YGL240W 753 nt6.88□□□□□ -1.31
SUB1P54000 COX5AYNL052W 462 nt6.88□□□□□ -1.31
SUB1P54000 MPE1YKL059C 1326 nt6.87□□□□□ -1.31
SUB1P54000 YUR1YJL139C 1287 nt6.87□□□□□ -1.31
SUB1P54000 PRT1YOR361C 2292 nt6.87□□□□□ -1.31
SUB1P54000 PLB2YMR006C 2121 nt6.86□□□□□ -1.31
SUB1P54000 URA3YEL021W 804 nt6.86□□□□□ -1.31
SUB1P54000 YPT1YFL038C 621 nt6.86□□□□□ -1.31
SUB1P54000 YKR032WYKR032W 315 nt6.86□□□□□ -1.31
SUB1P54000 PUP1YOR157C 786 nt6.86□□□□□ -1.31
SUB1P54000 HXT5YHR096C 1779 nt6.86□□□□□ -1.31
SUB1P54000 LCB2YDR062W 1686 nt6.86□□□□□ -1.31
SUB1P54000 FRE7YOL152W 1863 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)BtG(GCC)B 71 nt6.85□□□□□ -1.31
SUB1P54000 SUF16tG(GCC)C 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)D1tG(GCC)D1 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)D2tG(GCC)D2 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)EtG(GCC)E 71 nt6.85□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms