Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 RPL21AYBR191W 483 nt7.81□□□□□ -1.16
RTR1P40084 ICL1YER065C 1674 nt7.81□□□□□ -1.16
RTR1P40084 SNU66YOR308C 1764 nt7.81□□□□□ -1.16
RTR1P40084 LYS21YDL131W 1323 nt7.8□□□□□ -1.16
RTR1P40084 TIM22YDL217C 624 nt7.8□□□□□ -1.16
RTR1P40084 AIM33YML087C 939 nt7.8□□□□□ -1.16
RTR1P40084 CAF40YNL288W 1122 nt7.8□□□□□ -1.16
RTR1P40084 RRS1YOR294W 612 nt7.8□□□□□ -1.16
RTR1P40084 VPS61YDR136C 573 nt7.79□□□□□ -1.16
RTR1P40084 IVY1YDR229W 1362 nt7.79□□□□□ -1.16
RTR1P40084 YHR070C-AYHR070C-A 411 nt7.78□□□□□ -1.16
RTR1P40084 RPS5YJR123W 678 nt7.78□□□□□ -1.16
RTR1P40084 RTG2YGL252C 1767 nt7.78□□□□□ -1.16
RTR1P40084 CDC34YDR054C 888 nt7.77□□□□□ -1.17
RTR1P40084 LDS1YAL018C 978 nt7.77□□□□□ -1.17
RTR1P40084 HXT13YEL069C 1695 nt7.76□□□□□ -1.17
RTR1P40084 MDM31YHR194W 1740 nt7.76□□□□□ -1.17
RTR1P40084 BUD32YGR262C 786 nt7.76□□□□□ -1.17
RTR1P40084 YML133CYML133C 4125 nt7.76□□□□□ -1.17
RTR1P40084 GEF1YJR040W 2340 nt7.75□□□□□ -1.17
RTR1P40084 WHI2YOR043W 1461 nt7.75□□□□□ -1.17
RTR1P40084 YDR278CYDR278C 318 nt7.75□□□□□ -1.17
RTR1P40084 YMR119W-AYMR119W-A 375 nt7.75□□□□□ -1.17
RTR1P40084 HDA1YNL021W 2121 nt7.75□□□□□ -1.17
RTR1P40084 UTP4YDR324C 2331 nt7.74□□□□□ -1.17
RTR1P40084 GCV3YAL044C 513 nt7.74□□□□□ -1.17
RTR1P40084 EMP65YER140W 1671 nt7.73□□□□□ -1.17
RTR1P40084 YDR034W-BYDR034W-B 156 nt7.73□□□□□ -1.17
RTR1P40084 YGL235WYGL235W 537 nt7.73□□□□□ -1.17
RTR1P40084 MRPS16YPL013C 366 nt7.73□□□□□ -1.17
RTR1P40084 YEL068CYEL068C 333 nt7.72□□□□□ -1.17
RTR1P40084 DUS4YLR405W 1104 nt7.72□□□□□ -1.17
RTR1P40084 TSA1YML028W 591 nt7.72□□□□□ -1.17
RTR1P40084 DAP1YPL170W 459 nt7.72□□□□□ -1.17
RTR1P40084 SKS1YPL026C 1509 nt7.72□□□□□ -1.17
RTR1P40084 CDC13YDL220C 2775 nt7.71□□□□□ -1.17
RTR1P40084 GUD1YDL238C 1470 nt7.71□□□□□ -1.18
RTR1P40084 MOD5YOR274W 1287 nt7.71□□□□□ -1.18
RTR1P40084 PHO3YBR092C 1404 nt7.69□□□□□ -1.18
RTR1P40084 YJR154WYJR154W 1041 nt7.69□□□□□ -1.18
RTR1P40084 YPR114WYPR114W 948 nt7.69□□□□□ -1.18
RTR1P40084 YPR160C-AYPR160C-A 285 nt7.69□□□□□ -1.18
RTR1P40084 NDE1YMR145C 1683 nt7.69□□□□□ -1.18
RTR1P40084 tR(ACG)DtR(ACG)D 73 nt7.68□□□□□ -1.18
RTR1P40084 tR(ACG)EtR(ACG)E 73 nt7.68□□□□□ -1.18
RTR1P40084 tR(ACG)KtR(ACG)K 73 nt7.68□□□□□ -1.18
RTR1P40084 tR(ACG)LtR(ACG)L 73 nt7.68□□□□□ -1.18
RTR1P40084 tR(ACG)OtR(ACG)O 73 nt7.68□□□□□ -1.18
RTR1P40084 ECM19YLR390W 339 nt7.68□□□□□ -1.18
RTR1P40084 YNL042W-BYNL042W-B 258 nt7.68□□□□□ -1.18
RTR1P40084 RSP5YER125W 2430 nt7.68□□□□□ -1.18
RTR1P40084 UIP4YPL186C 915 nt7.67□□□□□ -1.18
RTR1P40084 HST3YOR025W 1344 nt7.67□□□□□ -1.18
RTR1P40084 BCY1YIL033C 1251 nt7.66□□□□□ -1.18
RTR1P40084 GCD11YER025W 1584 nt7.66□□□□□ -1.18
RTR1P40084 YJL045WYJL045W 1905 nt7.66□□□□□ -1.18
RTR1P40084 SIT4YDL047W 936 nt7.65□□□□□ -1.18
RTR1P40084 ICS3YJL077C 396 nt7.65□□□□□ -1.18
RTR1P40084 ENV7YPL236C 1095 nt7.65□□□□□ -1.18
RTR1P40084 MNS1YJR131W 1650 nt7.64□□□□□ -1.19
RTR1P40084 ADE12YNL220W 1302 nt7.64□□□□□ -1.19
RTR1P40084 YDL129WYDL129W 876 nt7.64□□□□□ -1.19
RTR1P40084 MRPL1YDR116C 858 nt7.64□□□□□ -1.19
RTR1P40084 TIF2YJL138C 1188 nt7.64□□□□□ -1.19
RTR1P40084 TIF1YKR059W 1188 nt7.64□□□□□ -1.19
RTR1P40084 ICL2YPR006C 1728 nt7.64□□□□□ -1.19
RTR1P40084 KKQ8YKL168C 2175 nt7.63□□□□□ -1.19
RTR1P40084 TEP1YNL128W 1305 nt7.63□□□□□ -1.19
RTR1P40084 RAD24YER173W 1980 nt7.63□□□□□ -1.19
RTR1P40084 COX20YDR231C 618 nt7.63□□□□□ -1.19
RTR1P40084 PHB1YGR132C 864 nt7.63□□□□□ -1.19
RTR1P40084 CIN4YMR138W 576 nt7.63□□□□□ -1.19
RTR1P40084 PYK2YOR347C 1521 nt7.62□□□□□ -1.19
RTR1P40084 NAS6YGR232W 687 nt7.62□□□□□ -1.19
RTR1P40084 HAP3YBL021C 435 nt7.62□□□□□ -1.19
RTR1P40084 YHM2YMR241W 945 nt7.62□□□□□ -1.19
RTR1P40084 PET112YBL080C 1626 nt7.61□□□□□ -1.19
RTR1P40084 RPT3YDR394W 1287 nt7.61□□□□□ -1.19
RTR1P40084 YPL102CYPL102C 303 nt7.61□□□□□ -1.19
RTR1P40084 ATG4YNL223W 1485 nt7.61□□□□□ -1.19
RTR1P40084 GPA2YER020W 1350 nt7.6□□□□□ -1.19
RTR1P40084 GTT3YEL017W 1014 nt7.6□□□□□ -1.19
RTR1P40084 YNL017CYNL017C 339 nt7.6□□□□□ -1.19
RTR1P40084 YOR200WYOR200W 399 nt7.6□□□□□ -1.19
RTR1P40084 LEU5YHR002W 1074 nt7.59□□□□□ -1.19
RTR1P40084 GYP8YFL027C 1494 nt7.58□□□□□ -1.2
RTR1P40084 MRPS12YNR036C 462 nt7.58□□□□□ -1.2
RTR1P40084 GLN3YER040W 2193 nt7.58□□□□□ -1.2
RTR1P40084 PFK2YMR205C 2880 nt7.57□□□□□ -1.2
RTR1P40084 GPI11YDR302W 660 nt7.57□□□□□ -1.2
RTR1P40084 YLR126CYLR126C 756 nt7.57□□□□□ -1.2
RTR1P40084 YML083CYML083C 1257 nt7.57□□□□□ -1.2
RTR1P40084 YEL023CYEL023C 2049 nt7.57□□□□□ -1.2
RTR1P40084 FRS2YFL022C 1512 nt7.57□□□□□ -1.2
RTR1P40084 SKY1YMR216C 2229 nt7.56□□□□□ -1.2
RTR1P40084 GLN1YPR035W 1113 nt7.56□□□□□ -1.2
RTR1P40084 GPB2YAL056W 2643 nt7.56□□□□□ -1.2
RTR1P40084 TPO3YPR156C 1869 nt7.55□□□□□ -1.2
RTR1P40084 PRI2YKL045W 1587 nt7.55□□□□□ -1.2
RTR1P40084 PRS2YER099C 957 nt7.55□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms