Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1P18754 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1P18754 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1P18754 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1P18754 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1P18754 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1P18754 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.33■□□□□ 0.85
RCC1P18754 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1P18754 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RCC1P18754 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1P18754 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.33■□□□□ 0.85
RCC1P18754 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1P18754 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1P18754 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCC1P18754 AL359258.2-201ENST00000564063 1566 ntBASIC20.33■□□□□ 0.84
RCC1P18754 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCC1P18754 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCC1P18754 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.33■□□□□ 0.84
RCC1P18754 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RCC1P18754 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCC1P18754 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.31■□□□□ 0.84
RCC1P18754 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.31■□□□□ 0.84
RCC1P18754 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCC1P18754 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RCC1P18754 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCC1P18754 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCC1P18754 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.3■□□□□ 0.84
RCC1P18754 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RCC1P18754 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.3■□□□□ 0.84
RCC1P18754 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCC1P18754 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCC1P18754 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.3■□□□□ 0.84
RCC1P18754 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCC1P18754 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCC1P18754 AC010501.1-201ENST00000606270 1962 ntBASIC20.29■□□□□ 0.84
RCC1P18754 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.29■□□□□ 0.84
RCC1P18754 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RCC1P18754 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCC1P18754 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCC1P18754 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCC1P18754 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RCC1P18754 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RCC1P18754 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1P18754 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1P18754 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.28■□□□□ 0.84
RCC1P18754 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1P18754 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.28■□□□□ 0.84
RCC1P18754 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1P18754 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.28■□□□□ 0.84
RCC1P18754 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1P18754 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1P18754 MIR3648-2-201ENST00000581792 180 ntBASIC20.27■□□□□ 0.84
RCC1P18754 MIR3648-1-201ENST00000615959 180 ntBASIC20.27■□□□□ 0.84
RCC1P18754 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RCC1P18754 AL359504.2-201ENST00000605506 1601 ntBASIC20.27■□□□□ 0.83
RCC1P18754 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
RCC1P18754 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RCC1P18754 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.26■□□□□ 0.83
RCC1P18754 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.26■□□□□ 0.83
RCC1P18754 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1P18754 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
RCC1P18754 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.26■□□□□ 0.83
RCC1P18754 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1P18754 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.26■□□□□ 0.83
RCC1P18754 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1P18754 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RCC1P18754 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1P18754 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1P18754 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RCC1P18754 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1P18754 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1P18754 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1P18754 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.24■□□□□ 0.83
RCC1P18754 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1P18754 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.23■□□□□ 0.83
RCC1P18754 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCC1P18754 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCC1P18754 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RCC1P18754 AC016575.1-201ENST00000607026 382 ntBASIC20.23■□□□□ 0.83
RCC1P18754 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RCC1P18754 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1P18754 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RCC1P18754 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1P18754 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.22■□□□□ 0.83
RCC1P18754 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1P18754 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1P18754 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1P18754 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RCC1P18754 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1P18754 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.21■□□□□ 0.83
RCC1P18754 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.21■□□□□ 0.83
RCC1P18754 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RCC1P18754 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1P18754 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1P18754 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.21■□□□□ 0.83
RCC1P18754 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.21■□□□□ 0.83
RCC1P18754 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RCC1P18754 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RCC1P18754 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCC1P18754 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms