Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBCP0CG48 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
UBCP0CG48 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBCP0CG48 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBCP0CG48 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBCP0CG48 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
UBCP0CG48 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBCP0CG48 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
UBCP0CG48 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.1■□□□□ 0.97
UBCP0CG48 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.1■□□□□ 0.97
UBCP0CG48 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBCP0CG48 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.1■□□□□ 0.97
UBCP0CG48 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBCP0CG48 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBCP0CG48 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBCP0CG48 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBCP0CG48 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
UBCP0CG48 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.09■□□□□ 0.97
UBCP0CG48 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.09■□□□□ 0.97
UBCP0CG48 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBCP0CG48 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
UBCP0CG48 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBCP0CG48 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBCP0CG48 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
UBCP0CG48 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBCP0CG48 HLA-V-202ENST00000446817 847 ntBASIC21.08■□□□□ 0.97
UBCP0CG48 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBCP0CG48 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.08■□□□□ 0.97
UBCP0CG48 AC142381.3-201ENST00000568208 1670 ntBASIC21.08■□□□□ 0.96
UBCP0CG48 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.08■□□□□ 0.96
UBCP0CG48 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.08■□□□□ 0.96
UBCP0CG48 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBCP0CG48 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
UBCP0CG48 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBCP0CG48 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.07■□□□□ 0.96
UBCP0CG48 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.07■□□□□ 0.96
UBCP0CG48 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
UBCP0CG48 AL359504.2-201ENST00000605506 1601 ntBASIC21.07■□□□□ 0.96
UBCP0CG48 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBCP0CG48 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
UBCP0CG48 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.06■□□□□ 0.96
UBCP0CG48 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
UBCP0CG48 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBCP0CG48 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBCP0CG48 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
UBCP0CG48 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UBCP0CG48 AC096887.2-201ENST00000623443 1957 ntBASIC21.05■□□□□ 0.96
UBCP0CG48 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBCP0CG48 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBCP0CG48 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBCP0CG48 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
UBCP0CG48 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBCP0CG48 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBCP0CG48 ZNRF2P2-203ENST00000454624 420 ntBASIC21.04■□□□□ 0.96
UBCP0CG48 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBCP0CG48 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBCP0CG48 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBCP0CG48 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBCP0CG48 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBCP0CG48 AC126177.7-201ENST00000547904 679 ntBASIC21.03■□□□□ 0.96
UBCP0CG48 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.03■□□□□ 0.96
UBCP0CG48 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
UBCP0CG48 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
UBCP0CG48 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.03■□□□□ 0.96
UBCP0CG48 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBCP0CG48 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.02■□□□□ 0.96
UBCP0CG48 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBCP0CG48 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.02■□□□□ 0.96
UBCP0CG48 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBCP0CG48 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
UBCP0CG48 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.01■□□□□ 0.95
UBCP0CG48 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBCP0CG48 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.01■□□□□ 0.95
UBCP0CG48 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBCP0CG48 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UBCP0CG48 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBCP0CG48 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21■□□□□ 0.95
UBCP0CG48 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBCP0CG48 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 AC022211.4-201ENST00000625094 2161 ntBASIC20.99■□□□□ 0.95
UBCP0CG48 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UBCP0CG48 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBCP0CG48 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBCP0CG48 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBCP0CG48 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBCP0CG48 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms