Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NDUFS3O75489 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NDUFS3O75489 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.09■■□□□ 1.45
NDUFS3O75489 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NDUFS3O75489 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
NDUFS3O75489 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
NDUFS3O75489 GPX1-201ENST00000419349 1106 ntBASIC24.08■■□□□ 1.45
NDUFS3O75489 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NDUFS3O75489 AC010501.1-201ENST00000606270 1962 ntBASIC24.08■■□□□ 1.45
NDUFS3O75489 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
NDUFS3O75489 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.08■■□□□ 1.44
NDUFS3O75489 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.08■■□□□ 1.44
NDUFS3O75489 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NDUFS3O75489 MIR3960-201ENST00000583311 91 ntBASIC24.07■■□□□ 1.44
NDUFS3O75489 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDUFS3O75489 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDUFS3O75489 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDUFS3O75489 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NDUFS3O75489 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.06■■□□□ 1.44
NDUFS3O75489 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.06■■□□□ 1.44
NDUFS3O75489 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.06■■□□□ 1.44
NDUFS3O75489 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDUFS3O75489 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.06■■□□□ 1.44
NDUFS3O75489 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NDUFS3O75489 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.06■■□□□ 1.44
NDUFS3O75489 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDUFS3O75489 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDUFS3O75489 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.05■■□□□ 1.44
NDUFS3O75489 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDUFS3O75489 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDUFS3O75489 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDUFS3O75489 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
NDUFS3O75489 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDUFS3O75489 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
NDUFS3O75489 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
NDUFS3O75489 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.04■■□□□ 1.44
NDUFS3O75489 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NDUFS3O75489 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
NDUFS3O75489 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NDUFS3O75489 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.03■■□□□ 1.44
NDUFS3O75489 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NDUFS3O75489 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NDUFS3O75489 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.03■■□□□ 1.44
NDUFS3O75489 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NDUFS3O75489 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NDUFS3O75489 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.02■■□□□ 1.44
NDUFS3O75489 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NDUFS3O75489 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NDUFS3O75489 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NDUFS3O75489 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NDUFS3O75489 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24■■□□□ 1.43
NDUFS3O75489 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
NDUFS3O75489 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24■■□□□ 1.43
NDUFS3O75489 ABHD17AP3-201ENST00000503096 1137 ntBASIC24■■□□□ 1.43
NDUFS3O75489 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24■■□□□ 1.43
NDUFS3O75489 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NDUFS3O75489 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDUFS3O75489 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDUFS3O75489 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NDUFS3O75489 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.99■■□□□ 1.43
NDUFS3O75489 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
NDUFS3O75489 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDUFS3O75489 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NDUFS3O75489 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NDUFS3O75489 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.98■■□□□ 1.43
NDUFS3O75489 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NDUFS3O75489 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NDUFS3O75489 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NDUFS3O75489 RP9P-202ENST00000450133 1212 ntBASIC23.97■■□□□ 1.43
NDUFS3O75489 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.97■■□□□ 1.43
NDUFS3O75489 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NDUFS3O75489 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NDUFS3O75489 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
NDUFS3O75489 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NDUFS3O75489 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
NDUFS3O75489 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.95■■□□□ 1.42
NDUFS3O75489 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.95■■□□□ 1.42
NDUFS3O75489 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
NDUFS3O75489 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NDUFS3O75489 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
NDUFS3O75489 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
NDUFS3O75489 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.94■■□□□ 1.42
NDUFS3O75489 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NDUFS3O75489 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
NDUFS3O75489 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.94■■□□□ 1.42
NDUFS3O75489 AC007029.1-201ENST00000604183 313 ntBASIC23.94■■□□□ 1.42
NDUFS3O75489 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.94■■□□□ 1.42
NDUFS3O75489 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NDUFS3O75489 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.94■■□□□ 1.42
NDUFS3O75489 AC096887.2-201ENST00000623443 1957 ntBASIC23.94■■□□□ 1.42
NDUFS3O75489 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NDUFS3O75489 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NDUFS3O75489 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.93■■□□□ 1.42
NDUFS3O75489 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NDUFS3O75489 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.93■■□□□ 1.42
NDUFS3O75489 AC093536.1-201ENST00000569153 554 ntBASIC23.93■■□□□ 1.42
NDUFS3O75489 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.93■■□□□ 1.42
NDUFS3O75489 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NDUFS3O75489 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NDUFS3O75489 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms