Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC110285.7-201ENST00000624417 1536 ntBASIC16.42■□□□□ 0.22
NDUFA1O15239 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFA1O15239 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.42■□□□□ 0.22
NDUFA1O15239 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA1O15239 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA1O15239 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDUFA1O15239 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NDUFA1O15239 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.4■□□□□ 0.22
NDUFA1O15239 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NDUFA1O15239 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NDUFA1O15239 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NDUFA1O15239 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.4■□□□□ 0.22
NDUFA1O15239 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NDUFA1O15239 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.39■□□□□ 0.22
NDUFA1O15239 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.22
NDUFA1O15239 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 AC133561.1-201ENST00000568600 2415 ntBASIC16.39■□□□□ 0.21
NDUFA1O15239 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NDUFA1O15239 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 WHAMMP3-201ENST00000611636 1609 ntBASIC16.38■□□□□ 0.21
NDUFA1O15239 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA1O15239 DUX4L29-201ENST00000425409 679 ntBASIC16.38■□□□□ 0.21
NDUFA1O15239 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA1O15239 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.37■□□□□ 0.21
NDUFA1O15239 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NDUFA1O15239 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA1O15239 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.37■□□□□ 0.21
NDUFA1O15239 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDUFA1O15239 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.35■□□□□ 0.21
NDUFA1O15239 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA1O15239 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA1O15239 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA1O15239 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA1O15239 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 AC021231.2-201ENST00000594613 730 ntBASIC16.34■□□□□ 0.21
NDUFA1O15239 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NDUFA1O15239 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA1O15239 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.33■□□□□ 0.21
NDUFA1O15239 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.33■□□□□ 0.21
NDUFA1O15239 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.33■□□□□ 0.2
NDUFA1O15239 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NDUFA1O15239 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.33■□□□□ 0.2
NDUFA1O15239 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA1O15239 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.33■□□□□ 0.2
NDUFA1O15239 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms