Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM235A6NFC5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM235A6NFC5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM235A6NFC5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM235A6NFC5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM235A6NFC5 AP006261.1-201ENST00000584783 668 ntBASIC20.54■□□□□ 0.88
TMEM235A6NFC5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TMEM235A6NFC5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM235A6NFC5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM235A6NFC5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM235A6NFC5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TMEM235A6NFC5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM235A6NFC5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM235A6NFC5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM235A6NFC5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM235A6NFC5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM235A6NFC5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM235A6NFC5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM235A6NFC5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM235A6NFC5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM235A6NFC5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 AC044849.2-201ENST00000606596 710 ntBASIC20.47■□□□□ 0.87
TMEM235A6NFC5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM235A6NFC5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM235A6NFC5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM235A6NFC5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM235A6NFC5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM235A6NFC5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM235A6NFC5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
TMEM235A6NFC5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 AC021231.2-201ENST00000594613 730 ntBASIC20.45■□□□□ 0.86
TMEM235A6NFC5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM235A6NFC5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TMEM235A6NFC5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEM235A6NFC5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM235A6NFC5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM235A6NFC5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM235A6NFC5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms