Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC189A1A4V9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.08■■□□□ 1.45
CCDC189A1A4V9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC189A1A4V9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC189A1A4V9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC189A1A4V9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CCDC189A1A4V9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC189A1A4V9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC189A1A4V9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC189A1A4V9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.06■■□□□ 1.44
CCDC189A1A4V9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC189A1A4V9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC189A1A4V9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC189A1A4V9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.05■■□□□ 1.44
CCDC189A1A4V9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC189A1A4V9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC189A1A4V9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC189A1A4V9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CCDC189A1A4V9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC189A1A4V9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC189A1A4V9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC189A1A4V9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC189A1A4V9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.03■■□□□ 1.44
CCDC189A1A4V9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC189A1A4V9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC189A1A4V9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC189A1A4V9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 AC020928.2-201ENST00000588717 2197 ntBASIC24.02■■□□□ 1.44
CCDC189A1A4V9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC189A1A4V9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC189A1A4V9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC189A1A4V9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC189A1A4V9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC189A1A4V9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC189A1A4V9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24■■□□□ 1.43
CCDC189A1A4V9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC189A1A4V9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC189A1A4V9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC189A1A4V9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC189A1A4V9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC189A1A4V9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC189A1A4V9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC189A1A4V9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC189A1A4V9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC189A1A4V9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC189A1A4V9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.98■■□□□ 1.43
CCDC189A1A4V9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
CCDC189A1A4V9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC189A1A4V9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC189A1A4V9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.98■■□□□ 1.43
CCDC189A1A4V9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC189A1A4V9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 HLA-V-202ENST00000446817 847 ntBASIC23.97■■□□□ 1.43
CCDC189A1A4V9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CCDC189A1A4V9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC189A1A4V9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC189A1A4V9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC189A1A4V9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CCDC189A1A4V9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC189A1A4V9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC189A1A4V9 ABHD17AP4-201ENST00000411545 909 ntBASIC23.94■■□□□ 1.42
CCDC189A1A4V9 AC126177.7-201ENST00000547904 679 ntBASIC23.94■■□□□ 1.42
CCDC189A1A4V9 CR559946.2-201ENST00000623684 991 ntBASIC23.94■■□□□ 1.42
CCDC189A1A4V9 AL359258.2-201ENST00000564063 1566 ntBASIC23.94■■□□□ 1.42
CCDC189A1A4V9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC189A1A4V9 AC012676.1-201ENST00000574705 1949 ntBASIC23.94■■□□□ 1.42
CCDC189A1A4V9 AC010501.1-201ENST00000606270 1962 ntBASIC23.93■■□□□ 1.42
CCDC189A1A4V9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CCDC189A1A4V9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC189A1A4V9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC189A1A4V9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 AC079834.2-201ENST00000609776 1949 ntBASIC23.92■■□□□ 1.42
CCDC189A1A4V9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms