Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.37■■□□□ 1.49
TCRBV9S1A1TA0A576 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TCRBV9S1A1TA0A576 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TCRBV9S1A1TA0A576 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TCRBV9S1A1TA0A576 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 AC138932.3-201ENST00000567634 1902 ntBASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
TCRBV9S1A1TA0A576 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.35■■□□□ 1.49
TCRBV9S1A1TA0A576 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TCRBV9S1A1TA0A576 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.35■■□□□ 1.49
TCRBV9S1A1TA0A576 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TCRBV9S1A1TA0A576 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TCRBV9S1A1TA0A576 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.34■■□□□ 1.49
TCRBV9S1A1TA0A576 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TCRBV9S1A1TA0A576 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TCRBV9S1A1TA0A576 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.33■■□□□ 1.49
TCRBV9S1A1TA0A576 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.33■■□□□ 1.49
TCRBV9S1A1TA0A576 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TCRBV9S1A1TA0A576 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.33■■□□□ 1.49
TCRBV9S1A1TA0A576 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TCRBV9S1A1TA0A576 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TCRBV9S1A1TA0A576 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.32■■□□□ 1.48
TCRBV9S1A1TA0A576 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCRBV9S1A1TA0A576 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCRBV9S1A1TA0A576 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TCRBV9S1A1TA0A576 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 ZNRF2P2-203ENST00000454624 420 ntBASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TCRBV9S1A1TA0A576 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
TCRBV9S1A1TA0A576 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 AL139125.2-201ENST00000623134 1869 ntBASIC24.28■■□□□ 1.48
TCRBV9S1A1TA0A576 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TCRBV9S1A1TA0A576 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.27■■□□□ 1.48
TCRBV9S1A1TA0A576 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TCRBV9S1A1TA0A576 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TCRBV9S1A1TA0A576 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TCRBV9S1A1TA0A576 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.26■■□□□ 1.47
TCRBV9S1A1TA0A576 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TCRBV9S1A1TA0A576 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TCRBV9S1A1TA0A576 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TCRBV9S1A1TA0A576 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 CR559946.2-201ENST00000623684 991 ntBASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.24■■□□□ 1.47
TCRBV9S1A1TA0A576 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.23■■□□□ 1.47
TCRBV9S1A1TA0A576 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TCRBV9S1A1TA0A576 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.23■■□□□ 1.47
TCRBV9S1A1TA0A576 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.23■■□□□ 1.47
TCRBV9S1A1TA0A576 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.23■■□□□ 1.47
TCRBV9S1A1TA0A576 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TCRBV9S1A1TA0A576 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TCRBV9S1A1TA0A576 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.22■■□□□ 1.47
TCRBV9S1A1TA0A576 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TCRBV9S1A1TA0A576 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms