Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV20A0A0B4J274 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV20A0A0B4J274 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV20A0A0B4J274 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV20A0A0B4J274 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.35■□□□□ 0.85
TRAV20A0A0B4J274 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV20A0A0B4J274 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAV20A0A0B4J274 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV20A0A0B4J274 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRAV20A0A0B4J274 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRAV20A0A0B4J274 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV20A0A0B4J274 DUX4L9-201ENST00000449051 1259 ntBASIC20.33■□□□□ 0.85
TRAV20A0A0B4J274 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV20A0A0B4J274 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV20A0A0B4J274 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV20A0A0B4J274 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV20A0A0B4J274 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV20A0A0B4J274 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
TRAV20A0A0B4J274 BHLHE23-202ENST00000612929 1109 ntBASIC20.31■□□□□ 0.84
TRAV20A0A0B4J274 AC074183.2-201ENST00000623112 922 ntBASIC20.31■□□□□ 0.84
TRAV20A0A0B4J274 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV20A0A0B4J274 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV20A0A0B4J274 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 WHAMMP3-201ENST00000611636 1609 ntBASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 AC018755.3-202ENST00000596210 929 ntBASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 MIR6765-201ENST00000614092 87 ntBASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAV20A0A0B4J274 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV20A0A0B4J274 AL359504.2-201ENST00000605506 1601 ntBASIC20.27■□□□□ 0.84
TRAV20A0A0B4J274 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV20A0A0B4J274 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV20A0A0B4J274 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV20A0A0B4J274 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV20A0A0B4J274 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 AC139795.1-202ENST00000500444 432 ntBASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV20A0A0B4J274 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV20A0A0B4J274 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms