Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC020928.2-201ENST00000588717 2197 ntBASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV30A0A087WSZ9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV30A0A087WSZ9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV30A0A087WSZ9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 AL359504.2-201ENST00000605506 1601 ntBASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV30A0A087WSZ9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV30A0A087WSZ9 MIR3648-2-201ENST00000581792 180 ntBASIC18.87■□□□□ 0.61
TRAV30A0A087WSZ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV30A0A087WSZ9 MIR3648-1-201ENST00000615959 180 ntBASIC18.87■□□□□ 0.61
TRAV30A0A087WSZ9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRAV30A0A087WSZ9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV30A0A087WSZ9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRAV30A0A087WSZ9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV30A0A087WSZ9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV30A0A087WSZ9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV30A0A087WSZ9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV30A0A087WSZ9 ERN1-208ENST00000606895 2068 ntBASIC18.84■□□□□ 0.61
TRAV30A0A087WSZ9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TRAV30A0A087WSZ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV30A0A087WSZ9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV30A0A087WSZ9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV30A0A087WSZ9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV30A0A087WSZ9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV30A0A087WSZ9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV30A0A087WSZ9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV30A0A087WSZ9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV30A0A087WSZ9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV30A0A087WSZ9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV30A0A087WSZ9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV30A0A087WSZ9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV30A0A087WSZ9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV30A0A087WSZ9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRAV30A0A087WSZ9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV30A0A087WSZ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 AC016575.1-201ENST00000607026 382 ntBASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV30A0A087WSZ9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV30A0A087WSZ9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV30A0A087WSZ9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV30A0A087WSZ9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV30A0A087WSZ9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms