Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 AC132938.5-201ENST00000624980 1813 ntBASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 AL356309.3-201ENST00000624132 1934 ntBASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB1Q9Y5F3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 PMPCAP1-201ENST00000508114 1576 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 RPSAP43-201ENST00000402237 625 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 RPS8P6-201ENST00000426177 609 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 GPX1P2-201ENST00000429271 606 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 KRT18P3-201ENST00000451602 1288 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 RNA5SP415-201ENST00000517246 115 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 FZD10-202ENST00000539839 3282 ntBASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB1Q9Y5F3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 AL591424.1-201ENST00000442569 1213 ntBASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 AP000867.4-201ENST00000641616 219 ntBASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB1Q9Y5F3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms