Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 KRT8P9-201ENST00000558927 1449 ntBASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 AC092338.2-201ENST00000568827 1415 ntBASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.15□□□□□ -0.14
RCL1Q9Y2P8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
RCL1Q9Y2P8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RCL1Q9Y2P8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RCL1Q9Y2P8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 AC128676.1-201ENST00000454392 318 ntBASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 REXO1L10P-201ENST00000615707 1290 ntBASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 REXO1L12P-201ENST00000622156 912 ntBASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RCL1Q9Y2P8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 AC024243.1-201ENST00000609234 778 ntBASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 AC068587.6-202ENST00000641839 5619 ntBASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 AL135905.2-201ENST00000584934 1404 ntBASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms