Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 TREML5P-201ENST00000421694 576 ntBASIC16.33■□□□□ 0.2
LHX6Q9UPM6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 AC112698.1-201ENST00000510299 916 ntBASIC16.33■□□□□ 0.2
LHX6Q9UPM6 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 TMF1P1-201ENST00000576058 373 ntBASIC16.33■□□□□ 0.2
LHX6Q9UPM6 AL132655.2-201ENST00000596276 594 ntBASIC16.33■□□□□ 0.2
LHX6Q9UPM6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CU639417.3-201ENST00000624240 1404 ntBASIC16.33■□□□□ 0.2
LHX6Q9UPM6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX6Q9UPM6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 AC017083.2-201ENST00000608069 979 ntBASIC16.32■□□□□ 0.2
LHX6Q9UPM6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX6Q9UPM6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 NOC2LP1-202ENST00000452600 2235 ntBASIC16.31■□□□□ 0.2
LHX6Q9UPM6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 HTR7P1-202ENST00000624664 4411 ntBASIC16.31■□□□□ 0.2
LHX6Q9UPM6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AC140878.1-201ENST00000565277 250 ntBASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AC090079.2-201ENST00000575289 768 ntBASIC16.31■□□□□ 0.2
LHX6Q9UPM6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AL355816.2-201ENST00000610049 647 ntBASIC16.31■□□□□ 0.2
LHX6Q9UPM6 AC116407.2-201ENST00000613639 860 ntBASIC16.31■□□□□ 0.2
LHX6Q9UPM6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX6Q9UPM6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms