Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNMT3BQ9UBC3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 LINC00304-203ENST00000565008 1864 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AL671277.1-201ENST00000429656 993 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AC140658.5-201ENST00000438532 169 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 SPCS2P1-201ENST00000561636 679 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AC093520.2-201ENST00000561830 333 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AC026120.1-201ENST00000611536 926 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 LINC00628-201ENST00000628516 1289 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 LYSMD4-203ENST00000378904 2122 ntBASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNMT3BQ9UBC3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 AC012317.2-201ENST00000623305 2251 ntBASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 AL355306.1-201ENST00000415580 579 ntBASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 KRT8P48-201ENST00000515599 1220 ntBASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 AC025678.2-201ENST00000562061 970 ntBASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 AL645728.2-201ENST00000641974 660 ntBASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNMT3BQ9UBC3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNMT3BQ9UBC3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms