Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AL353779.1-201ENST00000434793 351 ntBASIC18.03■□□□□ 0.48
CHD7Q9P2D1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AC008738.7-201ENST00000609744 511 ntBASIC18.03■□□□□ 0.48
CHD7Q9P2D1 AC073592.8-201ENST00000624126 511 ntBASIC18.03■□□□□ 0.48
CHD7Q9P2D1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD7Q9P2D1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 AP3S2-216ENST00000617003 1561 ntBASIC18.02■□□□□ 0.48
CHD7Q9P2D1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 AC004945.1-201ENST00000416738 983 ntBASIC18.02■□□□□ 0.48
CHD7Q9P2D1 AC112492.5-201ENST00000421897 457 ntBASIC18.02■□□□□ 0.48
CHD7Q9P2D1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 AC027307.2-201ENST00000591252 911 ntBASIC18.02■□□□□ 0.48
CHD7Q9P2D1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD7Q9P2D1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 AC084346.2-201ENST00000607097 949 ntBASIC18.02■□□□□ 0.47
CHD7Q9P2D1 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.02■□□□□ 0.47
CHD7Q9P2D1 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.02■□□□□ 0.47
CHD7Q9P2D1 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.02■□□□□ 0.47
CHD7Q9P2D1 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.02■□□□□ 0.47
CHD7Q9P2D1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 AC012317.2-201ENST00000623305 2251 ntBASIC18.02■□□□□ 0.47
CHD7Q9P2D1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD7Q9P2D1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD7Q9P2D1 AC007541.1-201ENST00000570282 1469 ntBASIC18■□□□□ 0.47
CHD7Q9P2D1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CHD7Q9P2D1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18■□□□□ 0.47
CHD7Q9P2D1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 INE1-201ENST00000456273 945 ntBASIC18■□□□□ 0.47
CHD7Q9P2D1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18■□□□□ 0.47
CHD7Q9P2D1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18■□□□□ 0.47
CHD7Q9P2D1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHD7Q9P2D1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHD7Q9P2D1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD7Q9P2D1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms