Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AC005104.2-201ENST00000427818 678 ntBASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AL137013.1-201ENST00000432946 1228 ntBASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 AP001094.4-201ENST00000579008 2176 ntBASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB16Q9NRJ7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 PCDHB17P-201ENST00000539533 2393 ntBASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 STARP1-201ENST00000397973 869 ntBASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ZNF444P1-201ENST00000559497 298 ntBASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB16Q9NRJ7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PCDHB16Q9NRJ7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms